Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.98■□□□□ 0.79
MRE11P49959 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
MRE11P49959 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.97■□□□□ 0.79
MRE11P49959 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.97■□□□□ 0.79
MRE11P49959 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MRE11P49959 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 MIR3652-201ENST00000579335 131 ntBASIC19.97■□□□□ 0.79
MRE11P49959 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.97■□□□□ 0.79
MRE11P49959 AC011558.1-201ENST00000623459 338 ntBASIC19.97■□□□□ 0.79
MRE11P49959 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.97■□□□□ 0.79
MRE11P49959 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MRE11P49959 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.97■□□□□ 0.79
MRE11P49959 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.97■□□□□ 0.79
MRE11P49959 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
MRE11P49959 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MRE11P49959 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
MRE11P49959 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRE11P49959 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.96■□□□□ 0.79
MRE11P49959 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
MRE11P49959 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.96■□□□□ 0.79
MRE11P49959 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.96■□□□□ 0.79
MRE11P49959 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
MRE11P49959 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.96■□□□□ 0.79
MRE11P49959 NIFKP9-201ENST00000419265 221 ntBASIC19.96■□□□□ 0.79
MRE11P49959 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.96■□□□□ 0.79
MRE11P49959 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.96■□□□□ 0.79
MRE11P49959 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.96■□□□□ 0.79
MRE11P49959 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.96■□□□□ 0.79
MRE11P49959 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.96■□□□□ 0.79
MRE11P49959 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
MRE11P49959 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRE11P49959 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
MRE11P49959 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.79
MRE11P49959 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.79
MRE11P49959 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
MRE11P49959 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.95■□□□□ 0.78
MRE11P49959 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
MRE11P49959 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.95■□□□□ 0.78
MRE11P49959 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
MRE11P49959 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.95■□□□□ 0.78
MRE11P49959 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 DDX43P3-201ENST00000441064 443 ntBASIC19.95■□□□□ 0.78
MRE11P49959 AL359075.1-203ENST00000462729 1002 ntBASIC19.95■□□□□ 0.78
MRE11P49959 VENTXP5-201ENST00000523979 775 ntBASIC19.95■□□□□ 0.78
MRE11P49959 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.95■□□□□ 0.78
MRE11P49959 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.95■□□□□ 0.78
MRE11P49959 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
MRE11P49959 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.95■□□□□ 0.78
MRE11P49959 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
MRE11P49959 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.95■□□□□ 0.78
MRE11P49959 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRE11P49959 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MRE11P49959 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.94■□□□□ 0.78
MRE11P49959 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRE11P49959 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.94■□□□□ 0.78
MRE11P49959 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MRE11P49959 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
MRE11P49959 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRE11P49959 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MRE11P49959 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.94■□□□□ 0.78
MRE11P49959 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MRE11P49959 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.94■□□□□ 0.78
MRE11P49959 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.94■□□□□ 0.78
MRE11P49959 AC131212.4-201ENST00000623606 975 ntBASIC19.94■□□□□ 0.78
MRE11P49959 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.94■□□□□ 0.78
MRE11P49959 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms