Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ARCN1P48444 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
ARCN1P48444 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARCN1P48444 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARCN1P48444 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARCN1P48444 AL590787.1-201ENST00000568856 1315 ntBASIC17.12■□□□□ 0.33
ARCN1P48444 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.12■□□□□ 0.33
ARCN1P48444 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ARCN1P48444 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARCN1P48444 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.12■□□□□ 0.33
ARCN1P48444 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARCN1P48444 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARCN1P48444 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARCN1P48444 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARCN1P48444 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ARCN1P48444 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.12■□□□□ 0.33
ARCN1P48444 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.11■□□□□ 0.33
ARCN1P48444 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.11■□□□□ 0.33
ARCN1P48444 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ARCN1P48444 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ARCN1P48444 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.11■□□□□ 0.33
ARCN1P48444 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.11■□□□□ 0.33
ARCN1P48444 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.11■□□□□ 0.33
ARCN1P48444 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ARCN1P48444 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 PKD1P1-201ENST00000458669 6805 ntBASIC17.11■□□□□ 0.33
ARCN1P48444 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.11■□□□□ 0.33
ARCN1P48444 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.11■□□□□ 0.33
ARCN1P48444 AP002469.2-201ENST00000531724 424 ntBASIC17.11■□□□□ 0.33
ARCN1P48444 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.11■□□□□ 0.33
ARCN1P48444 AC064862.7-201ENST00000604520 867 ntBASIC17.11■□□□□ 0.33
ARCN1P48444 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.11■□□□□ 0.33
ARCN1P48444 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ARCN1P48444 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.11■□□□□ 0.33
ARCN1P48444 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.11■□□□□ 0.33
ARCN1P48444 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.11■□□□□ 0.33
ARCN1P48444 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARCN1P48444 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.11■□□□□ 0.33
ARCN1P48444 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.1■□□□□ 0.33
ARCN1P48444 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
ARCN1P48444 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 AC092171.3-201ENST00000610122 2651 ntBASIC17.1■□□□□ 0.33
ARCN1P48444 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ARCN1P48444 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
ARCN1P48444 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
ARCN1P48444 AL645728.1-201ENST00000366221 2101 ntBASIC17.1■□□□□ 0.33
ARCN1P48444 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.1■□□□□ 0.33
ARCN1P48444 MRPL3P1-201ENST00000400109 1033 ntBASIC17.1■□□□□ 0.33
ARCN1P48444 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.1■□□□□ 0.33
ARCN1P48444 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.1■□□□□ 0.33
ARCN1P48444 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
ARCN1P48444 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.1■□□□□ 0.33
ARCN1P48444 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 AL160237.2-201ENST00000556165 472 ntBASIC17.1■□□□□ 0.33
ARCN1P48444 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.1■□□□□ 0.33
ARCN1P48444 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.1■□□□□ 0.33
ARCN1P48444 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.1■□□□□ 0.33
ARCN1P48444 AL022326.1-202ENST00000641533 845 ntBASIC17.1■□□□□ 0.33
ARCN1P48444 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
ARCN1P48444 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ARCN1P48444 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
ARCN1P48444 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARCN1P48444 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.09■□□□□ 0.33
ARCN1P48444 AL356309.3-201ENST00000624132 1934 ntBASIC17.09■□□□□ 0.33
ARCN1P48444 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.09■□□□□ 0.33
ARCN1P48444 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ARCN1P48444 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms