Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
THBS1P07996 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
THBS1P07996 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.74■□□□□ 0.11
THBS1P07996 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 PCDHB17P-201ENST00000539533 2393 ntBASIC15.73■□□□□ 0.11
THBS1P07996 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 OR6D1P-203ENST00000641209 4860 ntBASIC15.73■□□□□ 0.11
THBS1P07996 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.73■□□□□ 0.11
THBS1P07996 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
THBS1P07996 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
THBS1P07996 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
THBS1P07996 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.73■□□□□ 0.11
THBS1P07996 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
THBS1P07996 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 TSPY19P-201ENST00000418461 509 ntBASIC15.73■□□□□ 0.11
THBS1P07996 TSPY18P-201ENST00000441642 509 ntBASIC15.73■□□□□ 0.11
THBS1P07996 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.73■□□□□ 0.11
THBS1P07996 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 AL589935.2-201ENST00000616471 1231 ntBASIC15.73■□□□□ 0.11
THBS1P07996 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
THBS1P07996 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
THBS1P07996 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
THBS1P07996 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
THBS1P07996 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.73■□□□□ 0.11
THBS1P07996 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
THBS1P07996 PCDHA14-201ENST00000506751 2298 ntBASIC15.73■□□□□ 0.11
THBS1P07996 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
THBS1P07996 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.72■□□□□ 0.11
THBS1P07996 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
THBS1P07996 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 AL590787.1-201ENST00000568856 1315 ntBASIC15.72■□□□□ 0.11
THBS1P07996 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.72■□□□□ 0.11
THBS1P07996 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 AC004870.1-201ENST00000315132 882 ntBASIC15.72■□□□□ 0.11
THBS1P07996 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.72■□□□□ 0.11
THBS1P07996 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 AL121772.3-201ENST00000610840 674 ntBASIC15.72■□□□□ 0.11
THBS1P07996 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.72■□□□□ 0.11
THBS1P07996 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.72■□□□□ 0.11
THBS1P07996 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.72■□□□□ 0.11
THBS1P07996 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
THBS1P07996 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
THBS1P07996 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THBS1P07996 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.71■□□□□ 0.11
THBS1P07996 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.71■□□□□ 0.11
THBS1P07996 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.71■□□□□ 0.11
THBS1P07996 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
THBS1P07996 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
THBS1P07996 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.71■□□□□ 0.11
THBS1P07996 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THBS1P07996 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
THBS1P07996 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THBS1P07996 AL356309.3-201ENST00000624132 1934 ntBASIC15.71■□□□□ 0.11
THBS1P07996 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THBS1P07996 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
THBS1P07996 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
THBS1P07996 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.71■□□□□ 0.11
THBS1P07996 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.71■□□□□ 0.11
THBS1P07996 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.71■□□□□ 0.11
THBS1P07996 BX005266.1-201ENST00000473402 457 ntBASIC15.71■□□□□ 0.11
THBS1P07996 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms