Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC19.5■□□□□ 0.71
TPM2P07951 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.5■□□□□ 0.71
TPM2P07951 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TPM2P07951 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM2P07951 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TPM2P07951 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
TPM2P07951 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TPM2P07951 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
TPM2P07951 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TPM2P07951 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 FAM8A6P-201ENST00000407496 1135 ntBASIC19.49■□□□□ 0.71
TPM2P07951 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TPM2P07951 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TPM2P07951 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.49■□□□□ 0.71
TPM2P07951 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.49■□□□□ 0.71
TPM2P07951 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TPM2P07951 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM2P07951 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM2P07951 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM2P07951 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM2P07951 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
TPM2P07951 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM2P07951 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM2P07951 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.48■□□□□ 0.71
TPM2P07951 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 FLJ16779-201ENST00000612722 7638 ntBASIC19.48■□□□□ 0.71
TPM2P07951 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TPM2P07951 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TPM2P07951 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TPM2P07951 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TPM2P07951 BX276092.7-203ENST00000637198 1536 ntBASIC19.48■□□□□ 0.71
TPM2P07951 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TPM2P07951 TSPY12P-201ENST00000421279 868 ntBASIC19.48■□□□□ 0.71
TPM2P07951 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 AC009154.2-201ENST00000621177 724 ntBASIC19.48■□□□□ 0.71
TPM2P07951 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.48■□□□□ 0.71
TPM2P07951 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
TPM2P07951 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.48■□□□□ 0.71
TPM2P07951 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TPM2P07951 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TPM2P07951 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TPM2P07951 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM2P07951 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.48■□□□□ 0.71
TPM2P07951 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM2P07951 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TPM2P07951 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
TPM2P07951 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM2P07951 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TPM2P07951 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM2P07951 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TPM2P07951 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TPM2P07951 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TPM2P07951 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.47■□□□□ 0.71
TPM2P07951 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM2P07951 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM2P07951 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM2P07951 AL391807.1-203ENST00000604392 2365 ntBASIC19.47■□□□□ 0.71
TPM2P07951 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TPM2P07951 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM2P07951 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.47■□□□□ 0.71
TPM2P07951 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.47■□□□□ 0.71
TPM2P07951 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM2P07951 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TPM2P07951 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM2P07951 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.47■□□□□ 0.71
TPM2P07951 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM2P07951 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms