Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
CTSDP07339 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CTSDP07339 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CTSDP07339 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CTSDP07339 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CTSDP07339 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CTSDP07339 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.22□□□□□ -0.13
CTSDP07339 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSDP07339 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSDP07339 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CTSDP07339 AL645728.1-201ENST00000366221 2101 ntBASIC14.22□□□□□ -0.13
CTSDP07339 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSDP07339 FAM8A6P-201ENST00000407496 1135 ntBASIC14.22□□□□□ -0.13
CTSDP07339 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSDP07339 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.22□□□□□ -0.13
CTSDP07339 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.22□□□□□ -0.13
CTSDP07339 GPR32P1-201ENST00000601788 811 ntBASIC14.22□□□□□ -0.13
CTSDP07339 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CTSDP07339 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSDP07339 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CTSDP07339 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSDP07339 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CTSDP07339 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 AC006538.1-201ENST00000567905 1585 ntBASIC14.22□□□□□ -0.13
CTSDP07339 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSDP07339 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.21□□□□□ -0.13
CTSDP07339 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CTSDP07339 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
CTSDP07339 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 AC007967.3-201ENST00000434308 558 ntBASIC14.21□□□□□ -0.13
CTSDP07339 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.21□□□□□ -0.13
CTSDP07339 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 AC122714.2-201ENST00000502787 707 ntBASIC14.21□□□□□ -0.13
CTSDP07339 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.21□□□□□ -0.13
CTSDP07339 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSDP07339 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTSDP07339 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTSDP07339 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CTSDP07339 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.21□□□□□ -0.14
CTSDP07339 AC103702.1-201ENST00000548801 2630 ntBASIC14.21□□□□□ -0.14
CTSDP07339 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTSDP07339 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
CTSDP07339 AC132872.4-202ENST00000622924 2756 ntBASIC14.21□□□□□ -0.14
CTSDP07339 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.21□□□□□ -0.14
CTSDP07339 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
CTSDP07339 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.21□□□□□ -0.14
CTSDP07339 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTSDP07339 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTSDP07339 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CTSDP07339 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.2□□□□□ -0.14
CTSDP07339 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.2□□□□□ -0.14
CTSDP07339 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTSDP07339 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms