Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SOD2P04179 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOD2P04179 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOD2P04179 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOD2P04179 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOD2P04179 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.87■□□□□ 0.45
SOD2P04179 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOD2P04179 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOD2P04179 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.87■□□□□ 0.45
SOD2P04179 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOD2P04179 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.87■□□□□ 0.45
SOD2P04179 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SOD2P04179 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.87■□□□□ 0.45
SOD2P04179 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.87■□□□□ 0.45
SOD2P04179 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.87■□□□□ 0.45
SOD2P04179 ALG1L8P-201ENST00000533887 760 ntBASIC17.87■□□□□ 0.45
SOD2P04179 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SOD2P04179 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SOD2P04179 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SOD2P04179 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SOD2P04179 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SOD2P04179 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SOD2P04179 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SOD2P04179 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SOD2P04179 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOD2P04179 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SOD2P04179 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOD2P04179 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOD2P04179 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.86■□□□□ 0.45
SOD2P04179 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.86■□□□□ 0.45
SOD2P04179 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOD2P04179 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.86■□□□□ 0.45
SOD2P04179 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOD2P04179 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.86■□□□□ 0.45
SOD2P04179 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.86■□□□□ 0.45
SOD2P04179 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SOD2P04179 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.86■□□□□ 0.45
SOD2P04179 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SOD2P04179 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.86■□□□□ 0.45
SOD2P04179 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.86■□□□□ 0.45
SOD2P04179 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.86■□□□□ 0.45
SOD2P04179 MIR6080-201ENST00000617359 66 ntBASIC17.86■□□□□ 0.45
SOD2P04179 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SOD2P04179 FO538757.1-201ENST00000623083 1397 ntBASIC17.86■□□□□ 0.45
SOD2P04179 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOD2P04179 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.86■□□□□ 0.45
SOD2P04179 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.86■□□□□ 0.45
SOD2P04179 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.86■□□□□ 0.45
SOD2P04179 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.86■□□□□ 0.45
SOD2P04179 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.86■□□□□ 0.45
SOD2P04179 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOD2P04179 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.86■□□□□ 0.45
SOD2P04179 NOC2LP1-202ENST00000452600 2235 ntBASIC17.86■□□□□ 0.45
SOD2P04179 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOD2P04179 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOD2P04179 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SOD2P04179 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOD2P04179 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOD2P04179 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SOD2P04179 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SOD2P04179 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SOD2P04179 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SOD2P04179 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOD2P04179 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SOD2P04179 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.85■□□□□ 0.45
SOD2P04179 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOD2P04179 TREML5P-201ENST00000421694 576 ntBASIC17.85■□□□□ 0.45
SOD2P04179 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.85■□□□□ 0.45
SOD2P04179 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.85■□□□□ 0.45
SOD2P04179 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.85■□□□□ 0.45
SOD2P04179 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.85■□□□□ 0.45
SOD2P04179 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.85■□□□□ 0.45
SOD2P04179 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SOD2P04179 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.85■□□□□ 0.45
SOD2P04179 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SOD2P04179 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SOD2P04179 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.85■□□□□ 0.45
SOD2P04179 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SOD2P04179 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SOD2P04179 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.85■□□□□ 0.45
SOD2P04179 CYP2A7P1-201ENST00000595391 815 ntBASIC17.85■□□□□ 0.45
SOD2P04179 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.85■□□□□ 0.45
SOD2P04179 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.85■□□□□ 0.45
SOD2P04179 AL158211.3-201ENST00000607385 239 ntBASIC17.85■□□□□ 0.45
SOD2P04179 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SOD2P04179 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOD2P04179 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SOD2P04179 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOD2P04179 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOD2P04179 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOD2P04179 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SOD2P04179 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.84■□□□□ 0.45
SOD2P04179 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOD2P04179 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SOD2P04179 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOD2P04179 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.84■□□□□ 0.45
SOD2P04179 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOD2P04179 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.84■□□□□ 0.45
SOD2P04179 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.84■□□□□ 0.45
SOD2P04179 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms