Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CD4P01730 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.8■□□□□ 0.6
CD4P01730 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CD4P01730 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.8■□□□□ 0.6
CD4P01730 GAPDHP21-201ENST00000450301 1010 ntBASIC18.8■□□□□ 0.6
CD4P01730 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.8■□□□□ 0.6
CD4P01730 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.8■□□□□ 0.6
CD4P01730 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.8■□□□□ 0.6
CD4P01730 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.8■□□□□ 0.6
CD4P01730 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CD4P01730 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.8■□□□□ 0.6
CD4P01730 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CD4P01730 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD4P01730 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.8■□□□□ 0.6
CD4P01730 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CD4P01730 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CD4P01730 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.79■□□□□ 0.6
CD4P01730 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CD4P01730 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.79■□□□□ 0.6
CD4P01730 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CD4P01730 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CD4P01730 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.79■□□□□ 0.6
CD4P01730 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.79■□□□□ 0.6
CD4P01730 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 AL009183.1-201ENST00000603760 355 ntBASIC18.79■□□□□ 0.6
CD4P01730 AL158211.3-201ENST00000607385 239 ntBASIC18.79■□□□□ 0.6
CD4P01730 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CD4P01730 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CD4P01730 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.79■□□□□ 0.6
CD4P01730 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CD4P01730 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CD4P01730 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD4P01730 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.79■□□□□ 0.6
CD4P01730 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CD4P01730 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CD4P01730 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CD4P01730 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.78■□□□□ 0.6
CD4P01730 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 GK-202ENST00000378941 458 ntTSL 3 BASIC18.78■□□□□ 0.6
CD4P01730 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CD4P01730 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.78■□□□□ 0.6
CD4P01730 SPDYE7P-202ENST00000420373 878 ntBASIC18.78■□□□□ 0.6
CD4P01730 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.78■□□□□ 0.6
CD4P01730 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 IGHV3-62-201ENST00000520057 340 ntBASIC18.78■□□□□ 0.6
CD4P01730 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.78■□□□□ 0.6
CD4P01730 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.78■□□□□ 0.6
CD4P01730 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
CD4P01730 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.78■□□□□ 0.6
CD4P01730 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.78■□□□□ 0.6
CD4P01730 AL390754.1-201ENST00000619088 582 ntBASIC18.78■□□□□ 0.6
CD4P01730 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.78■□□□□ 0.6
CD4P01730 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD4P01730 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CD4P01730 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CD4P01730 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD4P01730 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.77■□□□□ 0.6
CD4P01730 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD4P01730 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD4P01730 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms