Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SIX6O95475 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SIX6O95475 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.35□□□□□ -0.11
SIX6O95475 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 AL355355.2-201ENST00000442321 338 ntBASIC14.35□□□□□ -0.11
SIX6O95475 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.35□□□□□ -0.11
SIX6O95475 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.35□□□□□ -0.11
SIX6O95475 AC124947.2-201ENST00000547118 1133 ntBASIC14.35□□□□□ -0.11
SIX6O95475 AC022517.1-201ENST00000592429 346 ntBASIC14.35□□□□□ -0.11
SIX6O95475 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SIX6O95475 AC112497.1-201ENST00000624824 639 ntBASIC14.35□□□□□ -0.11
SIX6O95475 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SIX6O95475 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SIX6O95475 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
SIX6O95475 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.35□□□□□ -0.11
SIX6O95475 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.35□□□□□ -0.11
SIX6O95475 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.35□□□□□ -0.11
SIX6O95475 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.35□□□□□ -0.11
SIX6O95475 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SIX6O95475 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SIX6O95475 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SIX6O95475 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.34□□□□□ -0.11
SIX6O95475 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.34□□□□□ -0.11
SIX6O95475 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.34□□□□□ -0.11
SIX6O95475 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SIX6O95475 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 AL391256.1-201ENST00000443260 1855 ntBASIC14.34□□□□□ -0.11
SIX6O95475 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.34□□□□□ -0.11
SIX6O95475 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SIX6O95475 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.34□□□□□ -0.11
SIX6O95475 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.34□□□□□ -0.11
SIX6O95475 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.34□□□□□ -0.11
SIX6O95475 AC006970.2-201ENST00000450065 779 ntBASIC14.34□□□□□ -0.11
SIX6O95475 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.34□□□□□ -0.11
SIX6O95475 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.34□□□□□ -0.11
SIX6O95475 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.34□□□□□ -0.11
SIX6O95475 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.34□□□□□ -0.11
SIX6O95475 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.34□□□□□ -0.11
SIX6O95475 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.34□□□□□ -0.11
SIX6O95475 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.34□□□□□ -0.11
SIX6O95475 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.34□□□□□ -0.11
SIX6O95475 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.34□□□□□ -0.11
SIX6O95475 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SIX6O95475 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIX6O95475 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.34□□□□□ -0.11
SIX6O95475 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SIX6O95475 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SIX6O95475 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.33□□□□□ -0.11
SIX6O95475 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.33□□□□□ -0.11
SIX6O95475 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SIX6O95475 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SIX6O95475 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SIX6O95475 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SIX6O95475 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SIX6O95475 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SIX6O95475 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SIX6O95475 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.33□□□□□ -0.11
SIX6O95475 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.33□□□□□ -0.12
SIX6O95475 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 KRT17P3-201ENST00000420566 1262 ntBASIC14.33□□□□□ -0.12
SIX6O95475 MFAP1P1-201ENST00000442257 1255 ntBASIC14.33□□□□□ -0.12
SIX6O95475 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms