Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF253O75346 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
ZNF253O75346 AL138966.2-201ENST00000621997 464 ntBASIC13.38□□□□□ -0.27
ZNF253O75346 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF253O75346 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF253O75346 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ZNF253O75346 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF253O75346 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF253O75346 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF253O75346 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ZNF253O75346 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF253O75346 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ZNF253O75346 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ZNF253O75346 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF253O75346 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF253O75346 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF253O75346 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 LINC01568-207ENST00000641790 1380 ntBASIC13.37□□□□□ -0.27
ZNF253O75346 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF253O75346 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ZNF253O75346 AC096633.1-201ENST00000422446 749 ntBASIC13.37□□□□□ -0.27
ZNF253O75346 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ZNF253O75346 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF253O75346 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF253O75346 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF253O75346 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.37□□□□□ -0.27
ZNF253O75346 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ZNF253O75346 AC004263.2-201ENST00000617183 678 ntBASIC13.37□□□□□ -0.27
ZNF253O75346 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ZNF253O75346 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ZNF253O75346 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ZNF253O75346 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
ZNF253O75346 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
ZNF253O75346 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF253O75346 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF253O75346 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
ZNF253O75346 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF253O75346 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF253O75346 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF253O75346 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF253O75346 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF253O75346 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF253O75346 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF253O75346 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ZNF253O75346 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF253O75346 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF253O75346 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 MYCLP1-201ENST00000372451 1075 ntBASIC13.36□□□□□ -0.27
ZNF253O75346 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.36□□□□□ -0.27
ZNF253O75346 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ZNF253O75346 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.36□□□□□ -0.27
ZNF253O75346 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms