Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 TOP3BP1-201ENST00000420768 1380 ntBASIC16.37■□□□□ 0.21
PRICKLE3O43900 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.37■□□□□ 0.21
PRICKLE3O43900 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
PRICKLE3O43900 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRICKLE3O43900 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PRICKLE3O43900 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PRICKLE3O43900 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PRICKLE3O43900 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.36■□□□□ 0.21
PRICKLE3O43900 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.36■□□□□ 0.21
PRICKLE3O43900 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PRICKLE3O43900 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PRICKLE3O43900 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRICKLE3O43900 PMS2P1-201ENST00000431037 1228 ntBASIC16.36■□□□□ 0.21
PRICKLE3O43900 KRT18P3-201ENST00000451602 1288 ntBASIC16.36■□□□□ 0.21
PRICKLE3O43900 CXCL1P1-201ENST00000502804 216 ntBASIC16.36■□□□□ 0.21
PRICKLE3O43900 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.36■□□□□ 0.21
PRICKLE3O43900 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
PRICKLE3O43900 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.36■□□□□ 0.21
PRICKLE3O43900 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRICKLE3O43900 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.36■□□□□ 0.21
PRICKLE3O43900 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.36■□□□□ 0.21
PRICKLE3O43900 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 KRT8P49-201ENST00000604166 1432 ntBASIC16.36■□□□□ 0.21
PRICKLE3O43900 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRICKLE3O43900 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 MED15P5-201ENST00000423150 992 ntBASIC16.35■□□□□ 0.21
PRICKLE3O43900 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 AC010507.1-201ENST00000633895 436 ntBASIC16.35■□□□□ 0.21
PRICKLE3O43900 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRICKLE3O43900 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.35■□□□□ 0.21
PRICKLE3O43900 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.34■□□□□ 0.21
PRICKLE3O43900 POLD2P1-201ENST00000511220 997 ntBASIC16.34■□□□□ 0.21
PRICKLE3O43900 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms