Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
SLC28A2O43868 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC28A2O43868 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC28A2O43868 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC28A2O43868 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC28A2O43868 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC28A2O43868 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC28A2O43868 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.5■□□□□ 0.23
SLC28A2O43868 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC28A2O43868 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC28A2O43868 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC28A2O43868 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC28A2O43868 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 AP005117.1-201ENST00000584346 1413 ntBASIC16.5■□□□□ 0.23
SLC28A2O43868 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC28A2O43868 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
SLC28A2O43868 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC28A2O43868 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC28A2O43868 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 AP002414.3-201ENST00000589352 1468 ntBASIC16.49■□□□□ 0.23
SLC28A2O43868 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC28A2O43868 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SLC28A2O43868 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC28A2O43868 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC28A2O43868 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.49■□□□□ 0.23
SLC28A2O43868 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC28A2O43868 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.49■□□□□ 0.23
SLC28A2O43868 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC28A2O43868 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SLC28A2O43868 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.49■□□□□ 0.23
SLC28A2O43868 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC28A2O43868 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC28A2O43868 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC28A2O43868 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC28A2O43868 AC064836.3-201ENST00000607928 673 ntBASIC16.49■□□□□ 0.23
SLC28A2O43868 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.49■□□□□ 0.23
SLC28A2O43868 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC28A2O43868 PCDHA12-202ENST00000613593 2588 ntBASIC16.49■□□□□ 0.23
SLC28A2O43868 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
SLC28A2O43868 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC28A2O43868 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC28A2O43868 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC28A2O43868 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SLC28A2O43868 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC28A2O43868 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC28A2O43868 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SLC28A2O43868 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC28A2O43868 MCCD1P2-201ENST00000423228 335 ntBASIC16.48■□□□□ 0.23
SLC28A2O43868 MTCL1P1-201ENST00000446207 792 ntBASIC16.48■□□□□ 0.23
SLC28A2O43868 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.48■□□□□ 0.23
SLC28A2O43868 YBX1P5-201ENST00000509441 847 ntBASIC16.48■□□□□ 0.23
SLC28A2O43868 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC28A2O43868 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.48■□□□□ 0.23
SLC28A2O43868 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.48■□□□□ 0.23
SLC28A2O43868 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms