Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.85□□□□□ -0.35
SNAI2O43623 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SNAI2O43623 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SNAI2O43623 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SNAI2O43623 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SNAI2O43623 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.85□□□□□ -0.35
SNAI2O43623 FAM201B-201ENST00000458407 597 ntBASIC12.85□□□□□ -0.35
SNAI2O43623 EGLN1P1-201ENST00000531623 762 ntBASIC12.85□□□□□ -0.35
SNAI2O43623 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.85□□□□□ -0.35
SNAI2O43623 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.85□□□□□ -0.35
SNAI2O43623 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.85□□□□□ -0.35
SNAI2O43623 AP000525.1-201ENST00000608286 694 ntBASIC12.85□□□□□ -0.35
SNAI2O43623 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.85□□□□□ -0.35
SNAI2O43623 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.85□□□□□ -0.35
SNAI2O43623 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.85□□□□□ -0.35
SNAI2O43623 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.85□□□□□ -0.35
SNAI2O43623 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.85□□□□□ -0.35
SNAI2O43623 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.85□□□□□ -0.35
SNAI2O43623 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SNAI2O43623 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
SNAI2O43623 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
SNAI2O43623 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SNAI2O43623 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.84□□□□□ -0.35
SNAI2O43623 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 AC005915.1-201ENST00000624912 2018 ntBASIC12.84□□□□□ -0.35
SNAI2O43623 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.84□□□□□ -0.35
SNAI2O43623 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.84□□□□□ -0.35
SNAI2O43623 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SNAI2O43623 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SNAI2O43623 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.84□□□□□ -0.35
SNAI2O43623 AC046185.3-201ENST00000623228 1824 ntBASIC12.84□□□□□ -0.35
SNAI2O43623 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.84□□□□□ -0.35
SNAI2O43623 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SNAI2O43623 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.84□□□□□ -0.35
SNAI2O43623 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SNAI2O43623 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.84□□□□□ -0.35
SNAI2O43623 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.84□□□□□ -0.35
SNAI2O43623 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.84□□□□□ -0.35
SNAI2O43623 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 AC128688.1-201ENST00000487626 519 ntBASIC12.84□□□□□ -0.35
SNAI2O43623 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.84□□□□□ -0.35
SNAI2O43623 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SNAI2O43623 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.84□□□□□ -0.35
SNAI2O43623 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.84□□□□□ -0.35
SNAI2O43623 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.84□□□□□ -0.35
SNAI2O43623 AC024563.2-201ENST00000603282 481 ntBASIC12.84□□□□□ -0.35
SNAI2O43623 AC009154.2-201ENST00000621177 724 ntBASIC12.84□□□□□ -0.35
SNAI2O43623 AL157888.1-201ENST00000631930 593 ntBASIC12.84□□□□□ -0.35
SNAI2O43623 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.84□□□□□ -0.35
SNAI2O43623 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.84□□□□□ -0.35
SNAI2O43623 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.84□□□□□ -0.35
SNAI2O43623 AC067930.6-201ENST00000623257 4947 ntBASIC12.84□□□□□ -0.35
SNAI2O43623 AL603756.1-201ENST00000606511 2163 ntBASIC12.84□□□□□ -0.35
SNAI2O43623 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SNAI2O43623 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNAI2O43623 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SNAI2O43623 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
SNAI2O43623 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.83□□□□□ -0.35
SNAI2O43623 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SNAI2O43623 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SNAI2O43623 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SNAI2O43623 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNAI2O43623 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SNAI2O43623 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 AC026691.1-201ENST00000602502 2017 ntBASIC12.83□□□□□ -0.36
SNAI2O43623 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms