Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK1AO00322 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.22■□□□□ 0.19
UPK1AO00322 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.22■□□□□ 0.19
UPK1AO00322 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
UPK1AO00322 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK1AO00322 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK1AO00322 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.22■□□□□ 0.19
UPK1AO00322 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK1AO00322 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
UPK1AO00322 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.22■□□□□ 0.19
UPK1AO00322 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
UPK1AO00322 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
UPK1AO00322 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.21■□□□□ 0.19
UPK1AO00322 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.21■□□□□ 0.19
UPK1AO00322 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.21■□□□□ 0.19
UPK1AO00322 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
UPK1AO00322 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.21■□□□□ 0.19
UPK1AO00322 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
UPK1AO00322 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 AC148477.5-201ENST00000625164 1645 ntBASIC16.21■□□□□ 0.19
UPK1AO00322 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 SPDYE21P-201ENST00000413323 827 ntBASIC16.21■□□□□ 0.19
UPK1AO00322 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
UPK1AO00322 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.21■□□□□ 0.19
UPK1AO00322 AC132008.2-207ENST00000454517 770 ntBASIC16.21■□□□□ 0.19
UPK1AO00322 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1AO00322 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
UPK1AO00322 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
UPK1AO00322 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.21■□□□□ 0.18
UPK1AO00322 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
UPK1AO00322 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
UPK1AO00322 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
UPK1AO00322 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
UPK1AO00322 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.2■□□□□ 0.18
UPK1AO00322 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
UPK1AO00322 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.2■□□□□ 0.18
UPK1AO00322 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.2■□□□□ 0.18
UPK1AO00322 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.2■□□□□ 0.18
UPK1AO00322 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
UPK1AO00322 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.2■□□□□ 0.18
UPK1AO00322 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
UPK1AO00322 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.2■□□□□ 0.18
UPK1AO00322 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.2■□□□□ 0.18
UPK1AO00322 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 AL020989.1-201ENST00000422979 469 ntBASIC16.2■□□□□ 0.18
UPK1AO00322 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.2■□□□□ 0.18
UPK1AO00322 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.2■□□□□ 0.18
UPK1AO00322 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.2■□□□□ 0.18
UPK1AO00322 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.2■□□□□ 0.18
UPK1AO00322 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 AC022188.1-201ENST00000620960 1664 ntBASIC16.2■□□□□ 0.18
UPK1AO00322 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
UPK1AO00322 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
UPK1AO00322 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.2■□□□□ 0.18
UPK1AO00322 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1AO00322 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
UPK1AO00322 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
UPK1AO00322 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 AP005117.1-201ENST00000584346 1413 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms