Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 AL353732.1-201ENST00000569618 1459 ntBASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 AL033527.4-201ENST00000641026 673 ntBASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 MIR4525-201ENST00000580000 75 ntBASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCH2Q9Y6C5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 DFFBP1-201ENST00000433250 979 ntBASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 AC011495.1-201ENST00000498085 584 ntBASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 MIR4259-201ENST00000584466 101 ntBASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 AC008494.3-201ENST00000606615 944 ntBASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms