Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 HLA-DQB1-201ENST00000374943 1656 ntBASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 FAM58CP-201ENST00000435741 640 ntBASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 OR7E47P-204ENST00000575924 449 ntBASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 AC092364.2-202ENST00000597012 1073 ntBASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 AC027612.4-201ENST00000605371 583 ntBASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA9Q9Y5G4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 AC141586.5-201ENST00000624546 2050 ntBASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 AL096828.2-201ENST00000567259 1965 ntBASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 MIR770-201ENST00000390219 98 ntBASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 LINC00982-205ENST00000420957 435 ntBASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 TSEN15P1-201ENST00000423257 515 ntBASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 AC011467.4-201ENST00000594891 528 ntBASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 AC025580.3-201ENST00000617932 1424 ntBASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms