Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIX4Q9UIU6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.21■□□□□ 0.51
SIX4Q9UIU6 AC025580.3-201ENST00000617932 1424 ntBASIC18.21■□□□□ 0.51
SIX4Q9UIU6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.21■□□□□ 0.51
SIX4Q9UIU6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIX4Q9UIU6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.21■□□□□ 0.51
SIX4Q9UIU6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.21■□□□□ 0.51
SIX4Q9UIU6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
SIX4Q9UIU6 BCAR1-209ENST00000546196 1340 ntBASIC18.21■□□□□ 0.51
SIX4Q9UIU6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIX4Q9UIU6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
SIX4Q9UIU6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
SIX4Q9UIU6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 AL121761.2-201ENST00000598007 1648 ntBASIC18.2■□□□□ 0.5
SIX4Q9UIU6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 AL021920.2-201ENST00000624828 1351 ntBASIC18.2■□□□□ 0.5
SIX4Q9UIU6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 AL513480.1-201ENST00000451731 511 ntBASIC18.2■□□□□ 0.5
SIX4Q9UIU6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 MPDU1-223ENST00000582151 728 ntBASIC18.2■□□□□ 0.5
SIX4Q9UIU6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX4Q9UIU6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 AC005412.3-201ENST00000580309 715 ntBASIC18.19■□□□□ 0.5
SIX4Q9UIU6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 AC023141.13-201ENST00000604991 943 ntBASIC18.19■□□□□ 0.5
SIX4Q9UIU6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 TUBB8P12-201ENST00000308911 1335 ntBASIC18.19■□□□□ 0.5
SIX4Q9UIU6 TUBB7P-202ENST00000428444 1305 ntBASIC18.19■□□□□ 0.5
SIX4Q9UIU6 TUBB8P7-204ENST00000567960 1332 ntBASIC18.19■□□□□ 0.5
SIX4Q9UIU6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIX4Q9UIU6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 AC022211.2-201ENST00000585075 2527 ntBASIC18.18■□□□□ 0.5
SIX4Q9UIU6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.18■□□□□ 0.5
SIX4Q9UIU6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms