Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 OR7E47P-204ENST00000575924 449 ntBASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 AC116407.3-201ENST00000623905 1129 ntBASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BLOC1S4Q9NUP1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 RPS2P28-201ENST00000314255 741 ntBASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 AC092910.1-201ENST00000482027 1129 ntBASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 AC107918.2-201ENST00000530817 355 ntBASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 AC092171.3-201ENST00000610122 2651 ntBASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.96■□□□□ 0.63
BLOC1S4Q9NUP1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 AL021920.2-201ENST00000624828 1351 ntBASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 AC084018.2-201ENST00000613093 2607 ntBASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms