Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 FAM8A6P-201ENST00000407496 1135 ntBASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 AC140113.3-201ENST00000605663 199 ntBASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 AC023824.1-201ENST00000562945 2975 ntBASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMBRD1Q9NUN5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LMBRD1Q9NUN5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
LMBRD1Q9NUN5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
LMBRD1Q9NUN5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LMBRD1Q9NUN5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 AC103564.2-201ENST00000432853 1299 ntBASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMBRD1Q9NUN5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 AC126177.1-201ENST00000547829 2218 ntBASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 AL603832.2-201ENST00000566195 2125 ntBASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 LINC01568-207ENST00000641790 1380 ntBASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 RNF126P1-202ENST00000569893 925 ntBASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
LMBRD1Q9NUN5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 AC144831.1-201ENST00000573312 2656 ntBASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms