Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 RN7SL589P-201ENST00000481268 310 ntBASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 MEIS3P1-201ENST00000495167 958 ntBASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 AP005018.1-201ENST00000525475 301 ntBASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 DUX4L17-201ENST00000557360 1267 ntBASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 EGFEM1P-202ENST00000431685 1563 ntBASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 AC140658.5-201ENST00000438532 169 ntBASIC19■□□□□ 0.63
PDLIM7Q9NR12 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 SLC25A39P2-201ENST00000537614 270 ntBASIC19■□□□□ 0.63
PDLIM7Q9NR12 AC243562.1-201ENST00000560672 389 ntBASIC19■□□□□ 0.63
PDLIM7Q9NR12 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDLIM7Q9NR12 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
PDLIM7Q9NR12 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 TREML5P-201ENST00000421694 576 ntBASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 SLC25A6P2-201ENST00000497974 877 ntBASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 AL390754.1-201ENST00000619088 582 ntBASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM7Q9NR12 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 AC141586.5-201ENST00000624546 2050 ntBASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms