Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.98■□□□□ 0.31
SSU72Q9NP77 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSU72Q9NP77 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.98■□□□□ 0.31
SSU72Q9NP77 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSU72Q9NP77 Z83836.1-201ENST00000624605 1642 ntBASIC16.98■□□□□ 0.31
SSU72Q9NP77 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSU72Q9NP77 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SSU72Q9NP77 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SSU72Q9NP77 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSU72Q9NP77 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SSU72Q9NP77 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.98■□□□□ 0.31
SSU72Q9NP77 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.98■□□□□ 0.31
SSU72Q9NP77 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSU72Q9NP77 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSU72Q9NP77 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 AL021920.2-201ENST00000624828 1351 ntBASIC16.97■□□□□ 0.31
SSU72Q9NP77 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 AC132872.4-202ENST00000622924 2756 ntBASIC16.97■□□□□ 0.31
SSU72Q9NP77 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SSU72Q9NP77 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSU72Q9NP77 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSU72Q9NP77 AC132938.5-201ENST00000624980 1813 ntBASIC16.96■□□□□ 0.31
SSU72Q9NP77 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSU72Q9NP77 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSU72Q9NP77 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSU72Q9NP77 GUSBP12-201ENST00000513727 720 ntBASIC16.96■□□□□ 0.31
SSU72Q9NP77 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 RNF126P1-202ENST00000569893 925 ntBASIC16.96■□□□□ 0.31
SSU72Q9NP77 AC011558.1-201ENST00000623459 338 ntBASIC16.96■□□□□ 0.31
SSU72Q9NP77 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SSU72Q9NP77 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SSU72Q9NP77 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SSU72Q9NP77 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SSU72Q9NP77 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SSU72Q9NP77 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SSU72Q9NP77 AC079328.2-201ENST00000561241 3354 ntBASIC16.95■□□□□ 0.3
SSU72Q9NP77 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSU72Q9NP77 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.95■□□□□ 0.3
SSU72Q9NP77 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms