Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 FLJ38576-201ENST00000623820 2459 ntBASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 AC091304.2-201ENST00000564639 760 ntBASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 TUBB8P12-201ENST00000308911 1335 ntBASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 TUBB7P-202ENST00000428444 1305 ntBASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 TUBB8P7-204ENST00000567960 1332 ntBASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 NCF1C-201ENST00000438382 1427 ntBASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 CROCCP1-201ENST00000426910 5675 ntBASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 NKAPP1-205ENST00000585790 367 ntBASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 MTDHP3-201ENST00000594186 672 ntBASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 AL355877.3-201ENST00000622820 899 ntBASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC40Q9H9A6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 AL353135.1-201ENST00000606729 504 ntBASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 PCDHA14-201ENST00000506751 2298 ntBASIC17.35■□□□□ 0.37
LRRC40Q9H9A6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms