Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 AL391005.1-201ENST00000623953 2435 ntBASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 AL135999.2-201ENST00000622438 1686 ntBASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 UPK3BP1-201ENST00000428678 509 ntBASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 SIGLEC30P-201ENST00000455569 941 ntBASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 AC138894.3-201ENST00000603787 634 ntBASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC68Q9H2F9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 AL020989.1-201ENST00000422979 469 ntBASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 AL591684.3-201ENST00000605187 298 ntBASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 PMPCAP1-201ENST00000508114 1576 ntBASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC68Q9H2F9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms