Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 AC087163.2-201ENST00000457299 853 ntBASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.11■□□□□ 0.65
CCSER1Q9C0I3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 AC008735.5-201ENST00000623544 497 ntBASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 AC099398.1-201ENST00000567919 2776 ntBASIC19.1■□□□□ 0.65
CCSER1Q9C0I3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 KRT18P67-201ENST00000432816 1264 ntBASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 AC104692.2-201ENST00000603054 253 ntBASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 REXO1L3P-201ENST00000622202 1288 ntBASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCSER1Q9C0I3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 PI4KAP1-204ENST00000612579 1703 ntBASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 TOP3BP1-201ENST00000420768 1380 ntBASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 AC002310.6-201ENST00000624451 1377 ntBASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.08■□□□□ 0.65
CCSER1Q9C0I3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms