Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 AC005104.2-201ENST00000427818 678 ntBASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 CHCHD2P8-201ENST00000429873 447 ntBASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 AC007967.3-201ENST00000434308 558 ntBASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 AC005336.2-201ENST00000593183 939 ntBASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRDL1Q9BU40 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CHRDL1Q9BU40 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CHRDL1Q9BU40 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.65□□□□□ -0.23
CHRDL1Q9BU40 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 LYSMD4-203ENST00000378904 2122 ntBASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 NORAD-201ENST00000565493 5339 ntBASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 IER3-202ENST00000376377 1350 ntBASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 COX5BP2-201ENST00000392354 334 ntBASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 AC091607.1-201ENST00000490318 1060 ntBASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 AL138831.2-201ENST00000606564 490 ntBASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 AC010331.1-201ENST00000611423 582 ntBASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRDL1Q9BU40 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms