Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
COL21A1Q96P44 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.21■□□□□ 0.18
COL21A1Q96P44 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COL21A1Q96P44 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COL21A1Q96P44 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
COL21A1Q96P44 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COL21A1Q96P44 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.2■□□□□ 0.18
COL21A1Q96P44 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL21A1Q96P44 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL21A1Q96P44 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL21A1Q96P44 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL21A1Q96P44 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL21A1Q96P44 PCDHA14-201ENST00000506751 2298 ntBASIC16.2■□□□□ 0.18
COL21A1Q96P44 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.2■□□□□ 0.18
COL21A1Q96P44 AC093525.9-201ENST00000624961 1746 ntBASIC16.2■□□□□ 0.18
COL21A1Q96P44 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL21A1Q96P44 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.2■□□□□ 0.18
COL21A1Q96P44 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
COL21A1Q96P44 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL21A1Q96P44 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL21A1Q96P44 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
COL21A1Q96P44 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL21A1Q96P44 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.2■□□□□ 0.18
COL21A1Q96P44 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.2■□□□□ 0.18
COL21A1Q96P44 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.2■□□□□ 0.18
COL21A1Q96P44 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.2■□□□□ 0.18
COL21A1Q96P44 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.2■□□□□ 0.18
COL21A1Q96P44 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL21A1Q96P44 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.2■□□□□ 0.18
COL21A1Q96P44 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.2■□□□□ 0.18
COL21A1Q96P44 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL21A1Q96P44 LINC02012-201ENST00000608206 1725 ntBASIC16.19■□□□□ 0.18
COL21A1Q96P44 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 AC046185.3-201ENST00000623228 1824 ntBASIC16.19■□□□□ 0.18
COL21A1Q96P44 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 AL049757.1-201ENST00000616842 1596 ntBASIC16.19■□□□□ 0.18
COL21A1Q96P44 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 AC132008.2-207ENST00000454517 770 ntBASIC16.19■□□□□ 0.18
COL21A1Q96P44 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL21A1Q96P44 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.19■□□□□ 0.18
COL21A1Q96P44 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL21A1Q96P44 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
COL21A1Q96P44 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.18■□□□□ 0.18
COL21A1Q96P44 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
COL21A1Q96P44 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL21A1Q96P44 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL21A1Q96P44 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL21A1Q96P44 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL21A1Q96P44 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms