Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 AC009336.1-201ENST00000608941 1553 ntBASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 AC122714.2-201ENST00000502787 707 ntBASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.84■□□□□ 0.77
CHAMP1Q96JM3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 DUX4L26-201ENST00000489078 1255 ntBASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.83■□□□□ 0.77
CHAMP1Q96JM3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 AC148477.5-201ENST00000625164 1645 ntBASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
CHAMP1Q96JM3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 AC063952.2-201ENST00000498792 1227 ntBASIC19.82■□□□□ 0.76
CHAMP1Q96JM3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms