Protein–RNA interactions for Protein: Q92989

CLP1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, humanhuman

Known RBP Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1Q92989 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CLP1Q92989 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLP1Q92989 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLP1Q92989 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.08■□□□□ 0.49
CLP1Q92989 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CLP1Q92989 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.08■□□□□ 0.49
CLP1Q92989 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLP1Q92989 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.08■□□□□ 0.49
CLP1Q92989 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CLP1Q92989 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CLP1Q92989 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.08■□□□□ 0.48
CLP1Q92989 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLP1Q92989 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.08■□□□□ 0.48
CLP1Q92989 AC241585.1-201ENST00000433527 519 ntBASIC18.08■□□□□ 0.48
CLP1Q92989 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLP1Q92989 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.08■□□□□ 0.48
CLP1Q92989 CR383656.12-201ENST00000549567 513 ntBASIC18.08■□□□□ 0.48
CLP1Q92989 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.08■□□□□ 0.48
CLP1Q92989 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CLP1Q92989 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.08■□□□□ 0.48
CLP1Q92989 AC090340.1-201ENST00000620778 4980 ntBASIC18.08■□□□□ 0.48
CLP1Q92989 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLP1Q92989 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLP1Q92989 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.08■□□□□ 0.48
CLP1Q92989 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLP1Q92989 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.07■□□□□ 0.48
CLP1Q92989 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.07■□□□□ 0.48
CLP1Q92989 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.07■□□□□ 0.48
CLP1Q92989 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CLP1Q92989 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CLP1Q92989 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.07■□□□□ 0.48
CLP1Q92989 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.07■□□□□ 0.48
CLP1Q92989 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.07■□□□□ 0.48
CLP1Q92989 AC091167.2-201ENST00000579581 588 ntBASIC18.07■□□□□ 0.48
CLP1Q92989 MIR4453-201ENST00000584019 89 ntBASIC18.07■□□□□ 0.48
CLP1Q92989 AL358472.5-202ENST00000641448 1267 ntBASIC18.07■□□□□ 0.48
CLP1Q92989 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CLP1Q92989 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.07■□□□□ 0.48
CLP1Q92989 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLP1Q92989 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.06■□□□□ 0.48
CLP1Q92989 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLP1Q92989 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 SLC22A20-204ENST00000530038 1673 ntBASIC18.06■□□□□ 0.48
CLP1Q92989 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLP1Q92989 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLP1Q92989 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLP1Q92989 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CLP1Q92989 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLP1Q92989 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLP1Q92989 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLP1Q92989 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 MRPS18AP1-201ENST00000414458 589 ntBASIC18.06■□□□□ 0.48
CLP1Q92989 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.06■□□□□ 0.48
CLP1Q92989 SERBP1P5-201ENST00000510079 1181 ntBASIC18.06■□□□□ 0.48
CLP1Q92989 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.06■□□□□ 0.48
CLP1Q92989 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLP1Q92989 SPDYE22P-201ENST00000582158 798 ntBASIC18.06■□□□□ 0.48
CLP1Q92989 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.06■□□□□ 0.48
CLP1Q92989 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.06■□□□□ 0.48
CLP1Q92989 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLP1Q92989 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLP1Q92989 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.06■□□□□ 0.48
CLP1Q92989 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLP1Q92989 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.06■□□□□ 0.48
CLP1Q92989 AC009113.1-201ENST00000570267 2443 ntBASIC18.06■□□□□ 0.48
CLP1Q92989 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLP1Q92989 TOP3BP1-201ENST00000420768 1380 ntBASIC18.05■□□□□ 0.48
CLP1Q92989 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLP1Q92989 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms