Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ERCC4Q92889 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC4Q92889 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.44■□□□□ 0.7
ERCC4Q92889 STK25P1-201ENST00000585406 838 ntBASIC19.44■□□□□ 0.7
ERCC4Q92889 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC4Q92889 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
ERCC4Q92889 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC4Q92889 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ERCC4Q92889 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC4Q92889 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC4Q92889 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC4Q92889 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.44■□□□□ 0.7
ERCC4Q92889 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC4Q92889 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.44■□□□□ 0.7
ERCC4Q92889 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC4Q92889 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC4Q92889 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC4Q92889 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC4Q92889 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC4Q92889 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ERCC4Q92889 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.43■□□□□ 0.7
ERCC4Q92889 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
ERCC4Q92889 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ERCC4Q92889 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
ERCC4Q92889 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC4Q92889 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC4Q92889 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.43■□□□□ 0.7
ERCC4Q92889 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC4Q92889 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
ERCC4Q92889 AL139384.1-201ENST00000612143 3047 ntBASIC19.43■□□□□ 0.7
ERCC4Q92889 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC4Q92889 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.43■□□□□ 0.7
ERCC4Q92889 MYCLP1-201ENST00000372451 1075 ntBASIC19.43■□□□□ 0.7
ERCC4Q92889 AC122714.2-201ENST00000502787 707 ntBASIC19.43■□□□□ 0.7
ERCC4Q92889 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.43■□□□□ 0.7
ERCC4Q92889 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.43■□□□□ 0.7
ERCC4Q92889 AC011840.4-201ENST00000578471 627 ntBASIC19.43■□□□□ 0.7
ERCC4Q92889 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC4Q92889 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC4Q92889 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC4Q92889 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC4Q92889 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.43■□□□□ 0.7
ERCC4Q92889 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC4Q92889 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC4Q92889 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
ERCC4Q92889 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC4Q92889 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC4Q92889 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.43■□□□□ 0.7
ERCC4Q92889 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 AC132938.5-201ENST00000624980 1813 ntBASIC19.42■□□□□ 0.7
ERCC4Q92889 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.42■□□□□ 0.7
ERCC4Q92889 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 EGFEM1P-202ENST00000431685 1563 ntBASIC19.42■□□□□ 0.7
ERCC4Q92889 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.42■□□□□ 0.7
ERCC4Q92889 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
ERCC4Q92889 TMPOP1-202ENST00000424642 1267 ntBASIC19.42■□□□□ 0.7
ERCC4Q92889 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.42■□□□□ 0.7
ERCC4Q92889 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.42■□□□□ 0.7
ERCC4Q92889 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.42■□□□□ 0.7
ERCC4Q92889 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
ERCC4Q92889 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
ERCC4Q92889 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.42■□□□□ 0.7
ERCC4Q92889 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.42■□□□□ 0.7
ERCC4Q92889 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.42■□□□□ 0.7
ERCC4Q92889 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.42■□□□□ 0.7
ERCC4Q92889 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ERCC4Q92889 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
ERCC4Q92889 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC4Q92889 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 PCDHB17P-201ENST00000539533 2393 ntBASIC19.41■□□□□ 0.7
ERCC4Q92889 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.41■□□□□ 0.7
ERCC4Q92889 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ERCC4Q92889 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms