Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.13■□□□□ 0.01
AP3S1Q92572 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.13■□□□□ 0.01
AP3S1Q92572 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 AL137784.2-201ENST00000607332 1000 ntBASIC15.13■□□□□ 0.01
AP3S1Q92572 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
AP3S1Q92572 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.13■□□□□ 0.01
AP3S1Q92572 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.13■□□□□ 0.01
AP3S1Q92572 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.13■□□□□ 0.01
AP3S1Q92572 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
AP3S1Q92572 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.13■□□□□ 0.01
AP3S1Q92572 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.13■□□□□ 0.01
AP3S1Q92572 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.13■□□□□ 0.01
AP3S1Q92572 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
AP3S1Q92572 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.13■□□□□ 0.01
AP3S1Q92572 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.12■□□□□ 0.01
AP3S1Q92572 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.12■□□□□ 0.01
AP3S1Q92572 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
AP3S1Q92572 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
AP3S1Q92572 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.12■□□□□ 0.01
AP3S1Q92572 AC097488.1-201ENST00000507834 756 ntBASIC15.12■□□□□ 0.01
AP3S1Q92572 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.12■□□□□ 0.01
AP3S1Q92572 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.12■□□□□ 0.01
AP3S1Q92572 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.12■□□□□ 0.01
AP3S1Q92572 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
AP3S1Q92572 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.12■□□□□ 0.01
AP3S1Q92572 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
AP3S1Q92572 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.12■□□□□ 0.01
AP3S1Q92572 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.12■□□□□ 0.01
AP3S1Q92572 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
AP3S1Q92572 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.12■□□□□ 0.01
AP3S1Q92572 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
AP3S1Q92572 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.12■□□□□ 0.01
AP3S1Q92572 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
AP3S1Q92572 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.12■□□□□ 0.01
AP3S1Q92572 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S1Q92572 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S1Q92572 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
AP3S1Q92572 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S1Q92572 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 MYCLP1-201ENST00000372451 1075 ntBASIC15.11■□□□□ 0.01
AP3S1Q92572 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.11■□□□□ 0.01
AP3S1Q92572 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.11■□□□□ 0.01
AP3S1Q92572 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.11■□□□□ 0.01
AP3S1Q92572 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S1Q92572 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.11■□□□□ 0.01
AP3S1Q92572 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S1Q92572 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.11■□□□□ 0.01
AP3S1Q92572 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.11■□□□□ 0.01
AP3S1Q92572 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.11■□□□□ 0.01
AP3S1Q92572 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
AP3S1Q92572 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S1Q92572 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S1Q92572 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms