Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AL136317.3-201ENST00000618497 906 ntBASIC29.15■■■□□ 2.26
TRIM41Q8WV44 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC29.15■■■□□ 2.26
TRIM41Q8WV44 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC29.15■■■□□ 2.26
TRIM41Q8WV44 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC29.15■■■□□ 2.26
TRIM41Q8WV44 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
TRIM41Q8WV44 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC29.15■■■□□ 2.26
TRIM41Q8WV44 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
TRIM41Q8WV44 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC29.15■■■□□ 2.26
TRIM41Q8WV44 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 SERBP1P5-201ENST00000510079 1181 ntBASIC29.14■■■□□ 2.26
TRIM41Q8WV44 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 AC003101.2-201ENST00000612557 442 ntBASIC29.14■■■□□ 2.26
TRIM41Q8WV44 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC29.14■■■□□ 2.26
TRIM41Q8WV44 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
TRIM41Q8WV44 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
TRIM41Q8WV44 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 NEK7-201ENST00000367383 586 ntTSL 2 BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 PIN1P1-201ENST00000412108 996 ntBASIC29.13■■■□□ 2.25
TRIM41Q8WV44 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 MIR6727-201ENST00000620702 65 ntBASIC29.13■■■□□ 2.25
TRIM41Q8WV44 BCAR1-209ENST00000546196 1340 ntBASIC29.13■■■□□ 2.25
TRIM41Q8WV44 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 TPR-209ENST00000613151 2478 ntTSL 5 BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
TRIM41Q8WV44 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 OR7E47P-204ENST00000575924 449 ntBASIC29.12■■■□□ 2.25
TRIM41Q8WV44 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 FO538757.1-201ENST00000623083 1397 ntBASIC29.12■■■□□ 2.25
TRIM41Q8WV44 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TRIM41Q8WV44 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 VMA21-202ENST00000370361 693 ntTSL 5 BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 AC092933.1-201ENST00000393644 945 ntBASIC29.11■■■□□ 2.25
TRIM41Q8WV44 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 KRT19P2-202ENST00000557173 1012 ntBASIC29.11■■■□□ 2.25
TRIM41Q8WV44 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
TRIM41Q8WV44 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 RPL28-206ENST00000558752 671 ntTSL 3 BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC29.1■■■□□ 2.25
TRIM41Q8WV44 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms