Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 AC136632.2-201ENST00000512891 861 ntBASIC18.28■□□□□ 0.52
LMO3Q8TAP4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 AC013467.2-201ENST00000605472 835 ntBASIC18.28■□□□□ 0.52
LMO3Q8TAP4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 HLA-A-202ENST00000376806 1854 ntBASIC18.28■□□□□ 0.52
LMO3Q8TAP4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 AP002490.2-201ENST00000524791 560 ntBASIC18.27■□□□□ 0.52
LMO3Q8TAP4 AL160237.2-201ENST00000556165 472 ntBASIC18.27■□□□□ 0.52
LMO3Q8TAP4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 AL049840.3-201ENST00000602669 611 ntBASIC18.27■□□□□ 0.52
LMO3Q8TAP4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 AC008667.4-201ENST00000607370 168 ntBASIC18.27■□□□□ 0.52
LMO3Q8TAP4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMO3Q8TAP4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LMO3Q8TAP4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.27■□□□□ 0.51
LMO3Q8TAP4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LMO3Q8TAP4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.27■□□□□ 0.51
LMO3Q8TAP4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
LMO3Q8TAP4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 MRPL3P1-201ENST00000400109 1033 ntBASIC18.26■□□□□ 0.51
LMO3Q8TAP4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 AF186996.4-201ENST00000467186 377 ntBASIC18.26■□□□□ 0.51
LMO3Q8TAP4 IGHV3-65-201ENST00000523210 341 ntBASIC18.26■□□□□ 0.51
LMO3Q8TAP4 AC107918.2-201ENST00000530817 355 ntBASIC18.26■□□□□ 0.51
LMO3Q8TAP4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 AC105339.3-201ENST00000560043 636 ntBASIC18.26■□□□□ 0.51
LMO3Q8TAP4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 MIR4492-201ENST00000581627 80 ntBASIC18.26■□□□□ 0.51
LMO3Q8TAP4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 AL356488.2-201ENST00000602755 427 ntBASIC18.26■□□□□ 0.51
LMO3Q8TAP4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 SNX33P1-201ENST00000592116 1762 ntBASIC18.26■□□□□ 0.51
LMO3Q8TAP4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 AC006277.1-201ENST00000624348 1610 ntBASIC18.26■□□□□ 0.51
LMO3Q8TAP4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO3Q8TAP4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 UBALD1-205ENST00000590891 2641 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms