Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 PDPK2P-202ENST00000562415 1191 ntBASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 AC004835.2-201ENST00000603762 682 ntBASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
SLC17A8Q8NDX2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC17A8Q8NDX2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 BASP1P1-201ENST00000430708 665 ntBASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 AC108751.1-201ENST00000490852 363 ntBASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 MTDHP4-201ENST00000600287 670 ntBASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 AC005593.1-201ENST00000624894 515 ntBASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC17A8Q8NDX2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
SLC17A8Q8NDX2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC17A8Q8NDX2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms