Protein–RNA interactions for Protein: Q8NC56

LEMD2, LEM domain-containing protein 2, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2Q8NC56 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
LEMD2Q8NC56 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 AKAP8P1-201ENST00000434743 1349 ntBASIC17.79■□□□□ 0.44
LEMD2Q8NC56 FZD10-202ENST00000539839 3282 ntBASIC17.79■□□□□ 0.44
LEMD2Q8NC56 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 SPDYE11-202ENST00000450699 704 ntBASIC17.79■□□□□ 0.44
LEMD2Q8NC56 TIMM8BP1-201ENST00000452384 211 ntBASIC17.79■□□□□ 0.44
LEMD2Q8NC56 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 SPDYE9P-201ENST00000570642 692 ntBASIC17.79■□□□□ 0.44
LEMD2Q8NC56 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 LINC02084-201ENST00000606069 1096 ntBASIC17.79■□□□□ 0.44
LEMD2Q8NC56 AC099522.2-201ENST00000607001 744 ntBASIC17.79■□□□□ 0.44
LEMD2Q8NC56 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 SPDYE10P-202ENST00000612005 668 ntBASIC17.79■□□□□ 0.44
LEMD2Q8NC56 SPDYE8P-202ENST00000612377 668 ntBASIC17.79■□□□□ 0.44
LEMD2Q8NC56 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 PRORSD1P-202ENST00000563365 2154 ntBASIC17.79■□□□□ 0.44
LEMD2Q8NC56 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.79■□□□□ 0.44
LEMD2Q8NC56 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 AL627223.1-201ENST00000416693 442 ntBASIC17.78■□□□□ 0.44
LEMD2Q8NC56 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 AC009093.7-201ENST00000623853 1223 ntBASIC17.78■□□□□ 0.44
LEMD2Q8NC56 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LEMD2Q8NC56 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LEMD2Q8NC56 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LEMD2Q8NC56 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.77■□□□□ 0.44
LEMD2Q8NC56 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LEMD2Q8NC56 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms