Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 AL118508.1-201ENST00000613502 2345 ntBASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CDKL3Q8IVW4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.58■□□□□ 0.41
CDKL3Q8IVW4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CDKL3Q8IVW4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDKL3Q8IVW4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.58■□□□□ 0.41
CDKL3Q8IVW4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDKL3Q8IVW4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.58■□□□□ 0.41
CDKL3Q8IVW4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDKL3Q8IVW4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.58■□□□□ 0.41
CDKL3Q8IVW4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 AC106795.1-205ENST00000512851 1056 ntBASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.58■□□□□ 0.4
CDKL3Q8IVW4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 RNF216P1-203ENST00000404404 2427 ntBASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 RBM17P3-201ENST00000417687 1192 ntBASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 BX005266.1-201ENST00000473402 457 ntBASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 MIR3652-201ENST00000579335 131 ntBASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL3Q8IVW4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms