Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CICP14-201ENST00000629111 2732 ntBASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 AC239809.2-201ENST00000415381 517 ntBASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 AC026748.1-201ENST00000624349 3251 ntBASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 AC005089.1-201ENST00000619486 2241 ntBASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 DDX43P3-201ENST00000441064 443 ntBASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 AC132938.6-201ENST00000623828 1655 ntBASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CROCCP3Q8IVE0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CROCCP3Q8IVE0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms