Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 AC044860.1-202ENST00000559481 777 ntBASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 CYP2A7P1-201ENST00000595391 815 ntBASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 AC099568.2-201ENST00000609194 695 ntBASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 HLA-DQB1-201ENST00000374943 1656 ntBASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 MFF-223ENST00000524634 647 ntTSL 2 BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 AC133552.6-201ENST00000613406 534 ntBASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SNAPC4Q5SXM2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 MIR6787-201ENST00000616675 61 ntBASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNAPC4Q5SXM2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 SLC9A3P2-201ENST00000447821 2021 ntBASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 MPDU1-223ENST00000582151 728 ntBASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 AP001350.2-201ENST00000625104 1094 ntBASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC27.48■■□□□ 1.99
SNAPC4Q5SXM2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 AC098850.1-201ENST00000419919 790 ntBASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 CROCCP4-201ENST00000457096 498 ntBASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 AC068587.10-201ENST00000641210 219 ntBASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 AC098818.2-201ENST00000564925 2320 ntBASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
SNAPC4Q5SXM2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC27.46■■□□□ 1.99
SNAPC4Q5SXM2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SNAPC4Q5SXM2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC27.46■■□□□ 1.99
SNAPC4Q5SXM2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SNAPC4Q5SXM2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SNAPC4Q5SXM2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
SNAPC4Q5SXM2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC27.46■■□□□ 1.99
SNAPC4Q5SXM2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SNAPC4Q5SXM2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SNAPC4Q5SXM2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
SNAPC4Q5SXM2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SNAPC4Q5SXM2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
SNAPC4Q5SXM2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC27.45■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms