Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.34■□□□□ 0.21
SPIN4Q56A73 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.34■□□□□ 0.21
SPIN4Q56A73 HCG4P8-203ENST00000443049 980 ntBASIC16.34■□□□□ 0.21
SPIN4Q56A73 AL121772.3-201ENST00000610840 674 ntBASIC16.34■□□□□ 0.21
SPIN4Q56A73 AL022326.1-202ENST00000641533 845 ntBASIC16.34■□□□□ 0.21
SPIN4Q56A73 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SPIN4Q56A73 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SPIN4Q56A73 TNRC18P3-201ENST00000441896 2691 ntBASIC16.34■□□□□ 0.21
SPIN4Q56A73 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 NCF1C-201ENST00000438382 1427 ntBASIC16.34■□□□□ 0.21
SPIN4Q56A73 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPIN4Q56A73 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
SPIN4Q56A73 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SPIN4Q56A73 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
SPIN4Q56A73 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPIN4Q56A73 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SPIN4Q56A73 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPIN4Q56A73 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPIN4Q56A73 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.33■□□□□ 0.2
SPIN4Q56A73 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SPIN4Q56A73 AL118508.1-201ENST00000613502 2345 ntBASIC16.33■□□□□ 0.2
SPIN4Q56A73 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.33■□□□□ 0.2
SPIN4Q56A73 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPIN4Q56A73 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPIN4Q56A73 AP002414.1-201ENST00000391405 1147 ntBASIC16.33■□□□□ 0.2
SPIN4Q56A73 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.33■□□□□ 0.2
SPIN4Q56A73 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.33■□□□□ 0.2
SPIN4Q56A73 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPIN4Q56A73 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPIN4Q56A73 AL021920.2-201ENST00000624828 1351 ntBASIC16.33■□□□□ 0.2
SPIN4Q56A73 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.33■□□□□ 0.2
SPIN4Q56A73 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPIN4Q56A73 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPIN4Q56A73 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPIN4Q56A73 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SPIN4Q56A73 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPIN4Q56A73 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.33■□□□□ 0.2
SPIN4Q56A73 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SPIN4Q56A73 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
SPIN4Q56A73 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.33■□□□□ 0.2
SPIN4Q56A73 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPIN4Q56A73 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPIN4Q56A73 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPIN4Q56A73 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.33■□□□□ 0.2
SPIN4Q56A73 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPIN4Q56A73 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPIN4Q56A73 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPIN4Q56A73 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPIN4Q56A73 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPIN4Q56A73 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPIN4Q56A73 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPIN4Q56A73 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPIN4Q56A73 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPIN4Q56A73 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPIN4Q56A73 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.32■□□□□ 0.2
SPIN4Q56A73 BX005266.1-201ENST00000473402 457 ntBASIC16.32■□□□□ 0.2
SPIN4Q56A73 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPIN4Q56A73 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPIN4Q56A73 AL353135.1-201ENST00000606729 504 ntBASIC16.32■□□□□ 0.2
SPIN4Q56A73 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 AL356309.3-201ENST00000624132 1934 ntBASIC16.32■□□□□ 0.2
SPIN4Q56A73 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SPIN4Q56A73 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 RNF216P1-203ENST00000404404 2427 ntBASIC16.31■□□□□ 0.2
SPIN4Q56A73 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms