Protein–RNA interactions for Protein: Q03591

CFHR1, Complement factor H-related protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1Q03591 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CFHR1Q03591 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CFHR1Q03591 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.22■□□□□ 0.19
CFHR1Q03591 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.22■□□□□ 0.19
CFHR1Q03591 BASP1P1-201ENST00000430708 665 ntBASIC16.22■□□□□ 0.19
CFHR1Q03591 AC005237.2-201ENST00000434368 219 ntBASIC16.22■□□□□ 0.19
CFHR1Q03591 TSPY16P-201ENST00000449843 468 ntBASIC16.22■□□□□ 0.19
CFHR1Q03591 AC069335.1-201ENST00000489972 472 ntBASIC16.22■□□□□ 0.19
CFHR1Q03591 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CFHR1Q03591 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.22■□□□□ 0.19
CFHR1Q03591 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.22■□□□□ 0.19
CFHR1Q03591 DUX4L27-201ENST00000554796 1261 ntBASIC16.22■□□□□ 0.19
CFHR1Q03591 LINC01225-203ENST00000563550 1244 ntBASIC16.22■□□□□ 0.19
CFHR1Q03591 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.22■□□□□ 0.19
CFHR1Q03591 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.22■□□□□ 0.19
CFHR1Q03591 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.22■□□□□ 0.19
CFHR1Q03591 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 GNAS-203ENST00000306120 1878 ntBASIC16.22■□□□□ 0.19
CFHR1Q03591 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.22■□□□□ 0.19
CFHR1Q03591 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CFHR1Q03591 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.22■□□□□ 0.19
CFHR1Q03591 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CFHR1Q03591 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR1Q03591 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.21■□□□□ 0.19
CFHR1Q03591 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.21■□□□□ 0.19
CFHR1Q03591 AKAP8P1-201ENST00000434743 1349 ntBASIC16.21■□□□□ 0.19
CFHR1Q03591 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.21■□□□□ 0.19
CFHR1Q03591 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CFHR1Q03591 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CFHR1Q03591 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR1Q03591 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.21■□□□□ 0.19
CFHR1Q03591 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR1Q03591 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CFHR1Q03591 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR1Q03591 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR1Q03591 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.21■□□□□ 0.19
CFHR1Q03591 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.21■□□□□ 0.19
CFHR1Q03591 SPCS2P4-201ENST00000436160 681 ntBASIC16.21■□□□□ 0.19
CFHR1Q03591 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.21■□□□□ 0.19
CFHR1Q03591 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR1Q03591 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CFHR1Q03591 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR1Q03591 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.21■□□□□ 0.19
CFHR1Q03591 MEIS3P1-201ENST00000495167 958 ntBASIC16.21■□□□□ 0.19
CFHR1Q03591 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.21■□□□□ 0.19
CFHR1Q03591 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.21■□□□□ 0.19
CFHR1Q03591 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR1Q03591 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.21■□□□□ 0.19
CFHR1Q03591 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR1Q03591 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CFHR1Q03591 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CFHR1Q03591 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR1Q03591 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.21■□□□□ 0.19
CFHR1Q03591 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR1Q03591 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.21■□□□□ 0.19
CFHR1Q03591 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.21■□□□□ 0.19
CFHR1Q03591 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.21■□□□□ 0.19
CFHR1Q03591 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CFHR1Q03591 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CFHR1Q03591 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CFHR1Q03591 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CFHR1Q03591 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CFHR1Q03591 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR1Q03591 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.2■□□□□ 0.18
CFHR1Q03591 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.2■□□□□ 0.18
CFHR1Q03591 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR1Q03591 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.2■□□□□ 0.18
CFHR1Q03591 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CFHR1Q03591 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR1Q03591 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CFHR1Q03591 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
CFHR1Q03591 AC068880.1-201ENST00000507289 2297 ntBASIC16.2■□□□□ 0.18
CFHR1Q03591 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.2■□□□□ 0.18
CFHR1Q03591 NOC2LP2-201ENST00000407594 1944 ntBASIC16.2■□□□□ 0.18
CFHR1Q03591 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CFHR1Q03591 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR1Q03591 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR1Q03591 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.2■□□□□ 0.18
CFHR1Q03591 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR1Q03591 HCG4-201ENST00000418983 998 ntBASIC16.2■□□□□ 0.18
CFHR1Q03591 GPS2P2-201ENST00000430745 888 ntBASIC16.2■□□□□ 0.18
CFHR1Q03591 AC245100.3-201ENST00000441281 285 ntBASIC16.2■□□□□ 0.18
CFHR1Q03591 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.2■□□□□ 0.18
CFHR1Q03591 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.2■□□□□ 0.18
CFHR1Q03591 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CFHR1Q03591 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR1Q03591 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CFHR1Q03591 AC109635.5-201ENST00000533593 962 ntBASIC16.2■□□□□ 0.18
CFHR1Q03591 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms