Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.29■□□□□ 0.36
PRAMEP78395 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEP78395 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEP78395 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.29■□□□□ 0.36
PRAMEP78395 AC132008.2-207ENST00000454517 770 ntBASIC17.29■□□□□ 0.36
PRAMEP78395 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEP78395 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.29■□□□□ 0.36
PRAMEP78395 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.29■□□□□ 0.36
PRAMEP78395 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEP78395 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.29■□□□□ 0.36
PRAMEP78395 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PRAMEP78395 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEP78395 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.29■□□□□ 0.36
PRAMEP78395 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEP78395 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEP78395 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEP78395 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRAMEP78395 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRAMEP78395 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 AC018695.7-201ENST00000624587 2492 ntBASIC17.28■□□□□ 0.36
PRAMEP78395 AC011676.5-201ENST00000624864 2660 ntBASIC17.28■□□□□ 0.36
PRAMEP78395 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PRAMEP78395 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PRAMEP78395 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEP78395 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEP78395 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 NKILA-202ENST00000614771 2598 ntBASIC17.28■□□□□ 0.36
PRAMEP78395 AC092053.1-201ENST00000605787 1936 ntBASIC17.28■□□□□ 0.36
PRAMEP78395 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
PRAMEP78395 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.28■□□□□ 0.36
PRAMEP78395 PRELID1P1-202ENST00000567272 903 ntBASIC17.28■□□□□ 0.36
PRAMEP78395 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.28■□□□□ 0.36
PRAMEP78395 AL121772.3-201ENST00000610840 674 ntBASIC17.28■□□□□ 0.36
PRAMEP78395 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEP78395 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PRAMEP78395 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEP78395 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEP78395 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEP78395 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRAMEP78395 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEP78395 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 AP005117.1-201ENST00000584346 1413 ntBASIC17.28■□□□□ 0.36
PRAMEP78395 SIGLEC16-201ENST00000599858 1437 ntBASIC17.28■□□□□ 0.36
PRAMEP78395 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
PRAMEP78395 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRAMEP78395 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEP78395 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEP78395 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PRAMEP78395 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.27■□□□□ 0.36
PRAMEP78395 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PRAMEP78395 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEP78395 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PRAMEP78395 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PRAMEP78395 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
PRAMEP78395 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEP78395 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEP78395 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.27■□□□□ 0.36
PRAMEP78395 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEP78395 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.27■□□□□ 0.36
PRAMEP78395 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.27■□□□□ 0.36
PRAMEP78395 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.27■□□□□ 0.36
PRAMEP78395 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
PRAMEP78395 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.27■□□□□ 0.36
PRAMEP78395 AL732292.2-201ENST00000609649 430 ntBASIC17.27■□□□□ 0.36
PRAMEP78395 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 AC079776.2-201ENST00000641154 1609 ntBASIC17.27■□□□□ 0.36
PRAMEP78395 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PRAMEP78395 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEP78395 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.27■□□□□ 0.35
PRAMEP78395 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEP78395 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEP78395 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEP78395 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms