Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRA2BP62995 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.12■□□□□ 0.17
TRA2BP62995 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.12■□□□□ 0.17
TRA2BP62995 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
TRA2BP62995 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.12■□□□□ 0.17
TRA2BP62995 UNC93B7-201ENST00000509439 705 ntBASIC16.12■□□□□ 0.17
TRA2BP62995 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.12■□□□□ 0.17
TRA2BP62995 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.12■□□□□ 0.17
TRA2BP62995 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.12■□□□□ 0.17
TRA2BP62995 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRA2BP62995 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.12■□□□□ 0.17
TRA2BP62995 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.12■□□□□ 0.17
TRA2BP62995 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRA2BP62995 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
TRA2BP62995 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRA2BP62995 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRA2BP62995 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TRA2BP62995 PCDHB17P-201ENST00000539533 2393 ntBASIC16.12■□□□□ 0.17
TRA2BP62995 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRA2BP62995 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRA2BP62995 LINC00895-201ENST00000629028 1637 ntBASIC16.12■□□□□ 0.17
TRA2BP62995 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRA2BP62995 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.11■□□□□ 0.17
TRA2BP62995 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TRA2BP62995 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRA2BP62995 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TRA2BP62995 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRA2BP62995 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.11■□□□□ 0.17
TRA2BP62995 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.11■□□□□ 0.17
TRA2BP62995 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRA2BP62995 PTCHD3P3-201ENST00000403073 906 ntBASIC16.11■□□□□ 0.17
TRA2BP62995 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.11■□□□□ 0.17
TRA2BP62995 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.11■□□□□ 0.17
TRA2BP62995 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.11■□□□□ 0.17
TRA2BP62995 OR7E14P-202ENST00000530490 1290 ntBASIC16.11■□□□□ 0.17
TRA2BP62995 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.11■□□□□ 0.17
TRA2BP62995 AL121912.1-201ENST00000603683 238 ntBASIC16.11■□□□□ 0.17
TRA2BP62995 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.11■□□□□ 0.17
TRA2BP62995 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRA2BP62995 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.11■□□□□ 0.17
TRA2BP62995 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.11■□□□□ 0.17
TRA2BP62995 AC078925.2-201ENST00000624013 1973 ntBASIC16.11■□□□□ 0.17
TRA2BP62995 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.11■□□□□ 0.17
TRA2BP62995 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.11■□□□□ 0.17
TRA2BP62995 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.11■□□□□ 0.17
TRA2BP62995 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRA2BP62995 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRA2BP62995 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TRA2BP62995 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRA2BP62995 OR6D1P-203ENST00000641209 4860 ntBASIC16.1■□□□□ 0.17
TRA2BP62995 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.1■□□□□ 0.17
TRA2BP62995 KRT18P27-201ENST00000427733 1299 ntBASIC16.1■□□□□ 0.17
TRA2BP62995 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 DUSP5P1-201ENST00000441325 1139 ntBASIC16.1■□□□□ 0.17
TRA2BP62995 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.1■□□□□ 0.17
TRA2BP62995 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.1■□□□□ 0.17
TRA2BP62995 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.1■□□□□ 0.17
TRA2BP62995 AC013467.2-201ENST00000605472 835 ntBASIC16.1■□□□□ 0.17
TRA2BP62995 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms