Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
AP3S2P59780 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.75□□□□□ -0.05
AP3S2P59780 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
AP3S2P59780 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.75□□□□□ -0.05
AP3S2P59780 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 OR2I1P-209ENST00000641730 5365 ntBASIC14.75□□□□□ -0.05
AP3S2P59780 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.75□□□□□ -0.05
AP3S2P59780 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 AC092850.2-201ENST00000623821 2697 ntBASIC14.75□□□□□ -0.05
AP3S2P59780 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
AP3S2P59780 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.74□□□□□ -0.05
AP3S2P59780 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
AP3S2P59780 AC099063.4-201ENST00000641099 1602 ntBASIC14.74□□□□□ -0.05
AP3S2P59780 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.74□□□□□ -0.05
AP3S2P59780 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.74□□□□□ -0.05
AP3S2P59780 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 AC092384.3-202ENST00000564646 2873 ntBASIC14.74□□□□□ -0.05
AP3S2P59780 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 MYCLP1-201ENST00000372451 1075 ntBASIC14.74□□□□□ -0.05
AP3S2P59780 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.74□□□□□ -0.05
AP3S2P59780 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 AC026271.2-201ENST00000428091 497 ntBASIC14.74□□□□□ -0.05
AP3S2P59780 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.74□□□□□ -0.05
AP3S2P59780 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.74□□□□□ -0.05
AP3S2P59780 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.74□□□□□ -0.05
AP3S2P59780 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.74□□□□□ -0.05
AP3S2P59780 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.74□□□□□ -0.05
AP3S2P59780 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.74□□□□□ -0.05
AP3S2P59780 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
AP3S2P59780 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 AC023824.1-201ENST00000562945 2975 ntBASIC14.74□□□□□ -0.05
AP3S2P59780 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.74□□□□□ -0.05
AP3S2P59780 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.74□□□□□ -0.05
AP3S2P59780 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.74□□□□□ -0.05
AP3S2P59780 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.74□□□□□ -0.05
AP3S2P59780 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.74□□□□□ -0.05
AP3S2P59780 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
AP3S2P59780 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S2P59780 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
AP3S2P59780 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
AP3S2P59780 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.73□□□□□ -0.05
AP3S2P59780 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
AP3S2P59780 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 AL161772.1-201ENST00000610494 4412 ntBASIC14.73□□□□□ -0.05
AP3S2P59780 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
AP3S2P59780 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.73□□□□□ -0.05
AP3S2P59780 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
AP3S2P59780 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.73□□□□□ -0.05
AP3S2P59780 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.73□□□□□ -0.05
AP3S2P59780 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.73□□□□□ -0.05
AP3S2P59780 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.73□□□□□ -0.05
AP3S2P59780 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.73□□□□□ -0.05
AP3S2P59780 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
AP3S2P59780 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
AP3S2P59780 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms