Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX3P56589 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PEX3P56589 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PEX3P56589 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.82■□□□□ 0.6
PEX3P56589 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.82■□□□□ 0.6
PEX3P56589 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.82■□□□□ 0.6
PEX3P56589 MIR940-201ENST00000401276 94 ntBASIC18.82■□□□□ 0.6
PEX3P56589 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.82■□□□□ 0.6
PEX3P56589 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.82■□□□□ 0.6
PEX3P56589 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.82■□□□□ 0.6
PEX3P56589 AC010654.1-201ENST00000615722 808 ntBASIC18.82■□□□□ 0.6
PEX3P56589 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PEX3P56589 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.82■□□□□ 0.6
PEX3P56589 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX3P56589 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PEX3P56589 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PEX3P56589 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PEX3P56589 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PEX3P56589 AC002310.6-201ENST00000624451 1377 ntBASIC18.81■□□□□ 0.6
PEX3P56589 AC092068.3-201ENST00000587894 2016 ntBASIC18.81■□□□□ 0.6
PEX3P56589 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.81■□□□□ 0.6
PEX3P56589 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PEX3P56589 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PEX3P56589 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PEX3P56589 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PEX3P56589 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.81■□□□□ 0.6
PEX3P56589 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PEX3P56589 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PEX3P56589 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.81■□□□□ 0.6
PEX3P56589 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PEX3P56589 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.81■□□□□ 0.6
PEX3P56589 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.81■□□□□ 0.6
PEX3P56589 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PEX3P56589 AC140113.2-201ENST00000604370 208 ntBASIC18.81■□□□□ 0.6
PEX3P56589 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.81■□□□□ 0.6
PEX3P56589 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PEX3P56589 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PEX3P56589 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PEX3P56589 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PEX3P56589 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.81■□□□□ 0.6
PEX3P56589 AC060834.1-201ENST00000443027 2032 ntBASIC18.81■□□□□ 0.6
PEX3P56589 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PEX3P56589 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PEX3P56589 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.81■□□□□ 0.6
PEX3P56589 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.8■□□□□ 0.6
PEX3P56589 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PEX3P56589 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PEX3P56589 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.8■□□□□ 0.6
PEX3P56589 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PEX3P56589 MED15P5-201ENST00000423150 992 ntBASIC18.8■□□□□ 0.6
PEX3P56589 AC124947.2-201ENST00000547118 1133 ntBASIC18.8■□□□□ 0.6
PEX3P56589 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.8■□□□□ 0.6
PEX3P56589 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.8■□□□□ 0.6
PEX3P56589 AC064836.3-201ENST00000607928 673 ntBASIC18.8■□□□□ 0.6
PEX3P56589 AC027601.4-201ENST00000611259 610 ntBASIC18.8■□□□□ 0.6
PEX3P56589 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PEX3P56589 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
PEX3P56589 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PEX3P56589 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PEX3P56589 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
PEX3P56589 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.8■□□□□ 0.6
PEX3P56589 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PEX3P56589 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PEX3P56589 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PEX3P56589 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.79■□□□□ 0.6
PEX3P56589 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.79■□□□□ 0.6
PEX3P56589 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PEX3P56589 HCG4B-203ENST00000450128 991 ntBASIC18.79■□□□□ 0.6
PEX3P56589 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms