Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH13P55290 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 NSUN5P1-202ENST00000421140 1535 ntBASIC16.76■□□□□ 0.27
CDH13P55290 NSUN5P2-203ENST00000457352 1529 ntBASIC16.76■□□□□ 0.27
CDH13P55290 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH13P55290 AL662844.4-201ENST00000606367 2838 ntBASIC16.76■□□□□ 0.27
CDH13P55290 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 GPR89P-201ENST00000407924 1495 ntBASIC16.76■□□□□ 0.27
CDH13P55290 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDH13P55290 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDH13P55290 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH13P55290 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH13P55290 LINC00265-3P-201ENST00000447588 903 ntBASIC16.76■□□□□ 0.27
CDH13P55290 KRT17P6-201ENST00000453795 1220 ntBASIC16.76■□□□□ 0.27
CDH13P55290 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.76■□□□□ 0.27
CDH13P55290 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.76■□□□□ 0.27
CDH13P55290 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH13P55290 AC087388.1-201ENST00000571370 1112 ntBASIC16.76■□□□□ 0.27
CDH13P55290 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.76■□□□□ 0.27
CDH13P55290 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH13P55290 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH13P55290 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CDH13P55290 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CDH13P55290 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH13P55290 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDH13P55290 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH13P55290 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH13P55290 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH13P55290 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDH13P55290 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH13P55290 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH13P55290 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH13P55290 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH13P55290 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH13P55290 AC148477.5-201ENST00000625164 1645 ntBASIC16.75■□□□□ 0.27
CDH13P55290 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH13P55290 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH13P55290 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH13P55290 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH13P55290 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH13P55290 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH13P55290 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH13P55290 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH13P55290 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.75■□□□□ 0.27
CDH13P55290 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH13P55290 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH13P55290 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH13P55290 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH13P55290 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH13P55290 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CDH13P55290 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDH13P55290 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDH13P55290 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH13P55290 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH13P55290 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH13P55290 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH13P55290 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH13P55290 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CDH13P55290 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDH13P55290 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH13P55290 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.74■□□□□ 0.27
CDH13P55290 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH13P55290 PMPCAP1-201ENST00000508114 1576 ntBASIC16.74■□□□□ 0.27
CDH13P55290 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH13P55290 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDH13P55290 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CDH13P55290 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDH13P55290 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.74■□□□□ 0.27
CDH13P55290 IGHV3-47-201ENST00000425060 335 ntBASIC16.74■□□□□ 0.27
CDH13P55290 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH13P55290 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.74■□□□□ 0.27
CDH13P55290 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH13P55290 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH13P55290 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH13P55290 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDH13P55290 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH13P55290 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms