Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.84■□□□□ 0.61
GPC3P51654 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.84■□□□□ 0.61
GPC3P51654 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC3P51654 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC3P51654 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
GPC3P51654 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC3P51654 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC3P51654 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.84■□□□□ 0.61
GPC3P51654 MKNK2P1-201ENST00000437526 628 ntBASIC18.84■□□□□ 0.61
GPC3P51654 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.84■□□□□ 0.61
GPC3P51654 AP006288.1-201ENST00000446065 395 ntBASIC18.84■□□□□ 0.61
GPC3P51654 DNAJB3-202ENST00000449667 1266 ntBASIC18.84■□□□□ 0.61
GPC3P51654 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.84■□□□□ 0.61
GPC3P51654 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC3P51654 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.84■□□□□ 0.61
GPC3P51654 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC3P51654 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC3P51654 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.84■□□□□ 0.61
GPC3P51654 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC3P51654 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC3P51654 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC3P51654 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC3P51654 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC3P51654 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC3P51654 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC3P51654 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GPC3P51654 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC3P51654 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GPC3P51654 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
GPC3P51654 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.83■□□□□ 0.61
GPC3P51654 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
GPC3P51654 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GPC3P51654 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GPC3P51654 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
GPC3P51654 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.83■□□□□ 0.61
GPC3P51654 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
GPC3P51654 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GPC3P51654 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GPC3P51654 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC3P51654 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
GPC3P51654 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
GPC3P51654 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.83■□□□□ 0.6
GPC3P51654 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.83■□□□□ 0.6
GPC3P51654 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.83■□□□□ 0.6
GPC3P51654 AC074386.1-202ENST00000463561 864 ntBASIC18.83■□□□□ 0.6
GPC3P51654 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
GPC3P51654 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.83■□□□□ 0.6
GPC3P51654 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC3P51654 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.83■□□□□ 0.6
GPC3P51654 AC079781.4-201ENST00000641908 219 ntBASIC18.83■□□□□ 0.6
GPC3P51654 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC3P51654 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC3P51654 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
GPC3P51654 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC3P51654 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.83■□□□□ 0.6
GPC3P51654 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GPC3P51654 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
GPC3P51654 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 AC116353.5-201ENST00000638148 1699 ntBASIC18.82■□□□□ 0.6
GPC3P51654 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.82■□□□□ 0.6
GPC3P51654 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GPC3P51654 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
GPC3P51654 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.82■□□□□ 0.6
GPC3P51654 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
GPC3P51654 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
GPC3P51654 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.82■□□□□ 0.6
GPC3P51654 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
GPC3P51654 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.82■□□□□ 0.6
GPC3P51654 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GPC3P51654 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.82■□□□□ 0.6
GPC3P51654 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.82■□□□□ 0.6
GPC3P51654 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.82■□□□□ 0.6
GPC3P51654 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC3P51654 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
GPC3P51654 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GPC3P51654 AC129492.6-201ENST00000611383 1305 ntBASIC18.81■□□□□ 0.6
GPC3P51654 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GPC3P51654 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms