Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 AL121761.2-201ENST00000598007 1648 ntBASIC15.25■□□□□ 0.03
CSNK1A1P48729 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 AC060834.1-201ENST00000443027 2032 ntBASIC15.24■□□□□ 0.03
CSNK1A1P48729 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 AC092053.1-201ENST00000605787 1936 ntBASIC15.24■□□□□ 0.03
CSNK1A1P48729 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 AC139887.3-201ENST00000568585 713 ntBASIC15.24■□□□□ 0.03
CSNK1A1P48729 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 AC064862.7-201ENST00000604520 867 ntBASIC15.24■□□□□ 0.03
CSNK1A1P48729 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CSNK1A1P48729 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1A1P48729 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.23■□□□□ 0.03
CSNK1A1P48729 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 AL353135.1-201ENST00000606729 504 ntBASIC15.23■□□□□ 0.03
CSNK1A1P48729 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1A1P48729 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CSNK1A1P48729 PCDHA12-202ENST00000613593 2588 ntBASIC15.23■□□□□ 0.03
CSNK1A1P48729 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms