Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL12P48061 SLC22A20-204ENST00000530038 1673 ntBASIC16.88■□□□□ 0.29
CXCL12P48061 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CXCL12P48061 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL12P48061 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL12P48061 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.88■□□□□ 0.29
CXCL12P48061 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.88■□□□□ 0.29
CXCL12P48061 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.88■□□□□ 0.29
CXCL12P48061 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.88■□□□□ 0.29
CXCL12P48061 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CXCL12P48061 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CXCL12P48061 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CXCL12P48061 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
CXCL12P48061 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL12P48061 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL12P48061 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL12P48061 ARSEP1-201ENST00000420443 635 ntBASIC16.88■□□□□ 0.29
CXCL12P48061 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.88■□□□□ 0.29
CXCL12P48061 HLA-V-204ENST00000476601 1289 ntBASIC16.88■□□□□ 0.29
CXCL12P48061 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.88■□□□□ 0.29
CXCL12P48061 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.88■□□□□ 0.29
CXCL12P48061 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.88■□□□□ 0.29
CXCL12P48061 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.88■□□□□ 0.29
CXCL12P48061 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.88■□□□□ 0.29
CXCL12P48061 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.88■□□□□ 0.29
CXCL12P48061 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CXCL12P48061 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL12P48061 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL12P48061 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CXCL12P48061 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL12P48061 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CXCL12P48061 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CXCL12P48061 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CXCL12P48061 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CXCL12P48061 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CXCL12P48061 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL12P48061 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL12P48061 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL12P48061 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CXCL12P48061 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL12P48061 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CXCL12P48061 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.87■□□□□ 0.29
CXCL12P48061 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL12P48061 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CXCL12P48061 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.87■□□□□ 0.29
CXCL12P48061 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL12P48061 AC142381.1-201ENST00000426099 345 ntBASIC16.87■□□□□ 0.29
CXCL12P48061 GPR53P-205ENST00000457298 1084 ntBASIC16.87■□□□□ 0.29
CXCL12P48061 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.87■□□□□ 0.29
CXCL12P48061 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL12P48061 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.87■□□□□ 0.29
CXCL12P48061 TP53TG3HP-202ENST00000569755 579 ntBASIC16.87■□□□□ 0.29
CXCL12P48061 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.87■□□□□ 0.29
CXCL12P48061 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL12P48061 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CXCL12P48061 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL12P48061 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCL12P48061 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CXCL12P48061 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCL12P48061 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCL12P48061 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCL12P48061 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCL12P48061 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.86■□□□□ 0.29
CXCL12P48061 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.86■□□□□ 0.29
CXCL12P48061 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CXCL12P48061 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCL12P48061 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCL12P48061 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CXCL12P48061 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCL12P48061 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.86■□□□□ 0.29
CXCL12P48061 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL12P48061 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms