Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MMP13P45452 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP13P45452 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP13P45452 AC006449.5-201ENST00000610658 2098 ntBASIC17.82■□□□□ 0.44
MMP13P45452 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.82■□□□□ 0.44
MMP13P45452 AC008741.2-201ENST00000612792 3115 ntBASIC17.82■□□□□ 0.44
MMP13P45452 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP13P45452 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
MMP13P45452 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.82■□□□□ 0.44
MMP13P45452 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MMP13P45452 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.82■□□□□ 0.44
MMP13P45452 AC132938.5-201ENST00000624980 1813 ntBASIC17.82■□□□□ 0.44
MMP13P45452 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MMP13P45452 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.81■□□□□ 0.44
MMP13P45452 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.81■□□□□ 0.44
MMP13P45452 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MMP13P45452 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.81■□□□□ 0.44
MMP13P45452 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.81■□□□□ 0.44
MMP13P45452 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 AC003669.1-201ENST00000334569 611 ntBASIC17.81■□□□□ 0.44
MMP13P45452 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.81■□□□□ 0.44
MMP13P45452 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.81■□□□□ 0.44
MMP13P45452 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.81■□□□□ 0.44
MMP13P45452 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.81■□□□□ 0.44
MMP13P45452 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.81■□□□□ 0.44
MMP13P45452 LINC01711-201ENST00000598340 967 ntBASIC17.81■□□□□ 0.44
MMP13P45452 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MMP13P45452 AP000867.4-201ENST00000641616 219 ntBASIC17.81■□□□□ 0.44
MMP13P45452 PMPCAP1-201ENST00000508114 1576 ntBASIC17.81■□□□□ 0.44
MMP13P45452 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MMP13P45452 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.81■□□□□ 0.44
MMP13P45452 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MMP13P45452 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.81■□□□□ 0.44
MMP13P45452 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP13P45452 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.81■□□□□ 0.44
MMP13P45452 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP13P45452 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.8■□□□□ 0.44
MMP13P45452 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.8■□□□□ 0.44
MMP13P45452 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP13P45452 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.8■□□□□ 0.44
MMP13P45452 KLF4P1-201ENST00000412782 1185 ntBASIC17.8■□□□□ 0.44
MMP13P45452 DUSP5P1-201ENST00000441325 1139 ntBASIC17.8■□□□□ 0.44
MMP13P45452 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.8■□□□□ 0.44
MMP13P45452 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.8■□□□□ 0.44
MMP13P45452 STK19B-204ENST00000512515 211 ntBASIC17.8■□□□□ 0.44
MMP13P45452 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP13P45452 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.8■□□□□ 0.44
MMP13P45452 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.8■□□□□ 0.44
MMP13P45452 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MMP13P45452 AP001269.4-201ENST00000609611 512 ntBASIC17.8■□□□□ 0.44
MMP13P45452 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
MMP13P45452 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
MMP13P45452 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
MMP13P45452 AL596257.1-201ENST00000641463 2694 ntBASIC17.8■□□□□ 0.44
MMP13P45452 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.8■□□□□ 0.44
MMP13P45452 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP13P45452 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MMP13P45452 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms