Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2CP42773 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKN2CP42773 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKN2CP42773 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2CP42773 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2CP42773 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKN2CP42773 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2CP42773 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2CP42773 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKN2CP42773 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDKN2CP42773 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKN2CP42773 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDKN2CP42773 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKN2CP42773 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2CP42773 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2CP42773 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2CP42773 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDKN2CP42773 LINC02199-201ENST00000506655 2702 ntBASIC16.19■□□□□ 0.18
CDKN2CP42773 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CDKN2CP42773 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2CP42773 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 PMPCAP1-201ENST00000508114 1576 ntBASIC16.19■□□□□ 0.18
CDKN2CP42773 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CDKN2CP42773 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 RCN1P2-201ENST00000398357 915 ntBASIC16.19■□□□□ 0.18
CDKN2CP42773 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.19■□□□□ 0.18
CDKN2CP42773 AC096582.2-201ENST00000510860 516 ntBASIC16.19■□□□□ 0.18
CDKN2CP42773 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.19■□□□□ 0.18
CDKN2CP42773 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2CP42773 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.19■□□□□ 0.18
CDKN2CP42773 AC116407.4-201ENST00000623319 1061 ntBASIC16.19■□□□□ 0.18
CDKN2CP42773 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKN2CP42773 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDKN2CP42773 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2CP42773 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKN2CP42773 NSUN5P1-202ENST00000421140 1535 ntBASIC16.19■□□□□ 0.18
CDKN2CP42773 NSUN5P2-203ENST00000457352 1529 ntBASIC16.19■□□□□ 0.18
CDKN2CP42773 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 AC008741.2-201ENST00000612792 3115 ntBASIC16.19■□□□□ 0.18
CDKN2CP42773 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKN2CP42773 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 HLA-A-202ENST00000376806 1854 ntBASIC16.18■□□□□ 0.18
CDKN2CP42773 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CDKN2CP42773 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CDKN2CP42773 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CDKN2CP42773 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
CDKN2CP42773 NUS1P1-201ENST00000446295 882 ntBASIC16.18■□□□□ 0.18
CDKN2CP42773 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.18■□□□□ 0.18
CDKN2CP42773 MINOS1P3-201ENST00000457048 203 ntBASIC16.18■□□□□ 0.18
CDKN2CP42773 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.18■□□□□ 0.18
CDKN2CP42773 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.18■□□□□ 0.18
CDKN2CP42773 TOB2P1-201ENST00000469761 992 ntBASIC16.18■□□□□ 0.18
CDKN2CP42773 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.18■□□□□ 0.18
CDKN2CP42773 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKN2CP42773 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CDKN2CP42773 AP002414.4-201ENST00000589764 1148 ntBASIC16.18■□□□□ 0.18
CDKN2CP42773 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.18■□□□□ 0.18
CDKN2CP42773 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKN2CP42773 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDKN2CP42773 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CDKN2CP42773 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKN2CP42773 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.18■□□□□ 0.18
CDKN2CP42773 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKN2CP42773 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKN2CP42773 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CDKN2CP42773 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKN2CP42773 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms