Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.7■□□□□ 0.58
USP8P40818 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
USP8P40818 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP8P40818 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP8P40818 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.7■□□□□ 0.58
USP8P40818 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP8P40818 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.7■□□□□ 0.58
USP8P40818 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.7■□□□□ 0.58
USP8P40818 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.7■□□□□ 0.58
USP8P40818 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.7■□□□□ 0.58
USP8P40818 STK19B-204ENST00000512515 211 ntBASIC18.7■□□□□ 0.58
USP8P40818 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.7■□□□□ 0.58
USP8P40818 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.7■□□□□ 0.58
USP8P40818 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.7■□□□□ 0.58
USP8P40818 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP8P40818 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP8P40818 AC138894.3-201ENST00000603787 634 ntBASIC18.7■□□□□ 0.58
USP8P40818 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP8P40818 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.7■□□□□ 0.58
USP8P40818 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.7■□□□□ 0.58
USP8P40818 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
USP8P40818 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP8P40818 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.7■□□□□ 0.58
USP8P40818 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.7■□□□□ 0.58
USP8P40818 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
USP8P40818 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP8P40818 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP8P40818 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP8P40818 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP8P40818 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP8P40818 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 INTS4P1-201ENST00000438455 1935 ntBASIC18.69■□□□□ 0.58
USP8P40818 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.69■□□□□ 0.58
USP8P40818 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.69■□□□□ 0.58
USP8P40818 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.69■□□□□ 0.58
USP8P40818 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.69■□□□□ 0.58
USP8P40818 STK25P1-201ENST00000585406 838 ntBASIC18.69■□□□□ 0.58
USP8P40818 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.69■□□□□ 0.58
USP8P40818 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
USP8P40818 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.69■□□□□ 0.58
USP8P40818 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP8P40818 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.69■□□□□ 0.58
USP8P40818 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.69■□□□□ 0.58
USP8P40818 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP8P40818 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP8P40818 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.68■□□□□ 0.58
USP8P40818 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
USP8P40818 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
USP8P40818 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.68■□□□□ 0.58
USP8P40818 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP8P40818 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
USP8P40818 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.68■□□□□ 0.58
USP8P40818 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.68■□□□□ 0.58
USP8P40818 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.68■□□□□ 0.58
USP8P40818 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.68■□□□□ 0.58
USP8P40818 AC114341.1-201ENST00000618070 349 ntBASIC18.68■□□□□ 0.58
USP8P40818 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
USP8P40818 AL353593.2-201ENST00000602529 1483 ntBASIC18.68■□□□□ 0.58
USP8P40818 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
USP8P40818 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms