Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.06■□□□□ 0.48
PCK1P35558 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.06■□□□□ 0.48
PCK1P35558 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.06■□□□□ 0.48
PCK1P35558 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.06■□□□□ 0.48
PCK1P35558 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.06■□□□□ 0.48
PCK1P35558 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.06■□□□□ 0.48
PCK1P35558 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.06■□□□□ 0.48
PCK1P35558 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PCK1P35558 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 AC148477.5-201ENST00000625164 1645 ntBASIC18.05■□□□□ 0.48
PCK1P35558 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.05■□□□□ 0.48
PCK1P35558 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCK1P35558 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCK1P35558 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.05■□□□□ 0.48
PCK1P35558 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PCK1P35558 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.05■□□□□ 0.48
PCK1P35558 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.05■□□□□ 0.48
PCK1P35558 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
PCK1P35558 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 AC124947.2-201ENST00000547118 1133 ntBASIC18.05■□□□□ 0.48
PCK1P35558 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.05■□□□□ 0.48
PCK1P35558 AC138894.3-201ENST00000603787 634 ntBASIC18.05■□□□□ 0.48
PCK1P35558 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.05■□□□□ 0.48
PCK1P35558 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.05■□□□□ 0.48
PCK1P35558 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCK1P35558 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.05■□□□□ 0.48
PCK1P35558 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 NKILA-202ENST00000614771 2598 ntBASIC18.05■□□□□ 0.48
PCK1P35558 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.05■□□□□ 0.48
PCK1P35558 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.05■□□□□ 0.48
PCK1P35558 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.05■□□□□ 0.48
PCK1P35558 AC079776.2-201ENST00000641154 1609 ntBASIC18.05■□□□□ 0.48
PCK1P35558 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCK1P35558 AC011676.5-201ENST00000624864 2660 ntBASIC18.05■□□□□ 0.48
PCK1P35558 AC060834.1-201ENST00000443027 2032 ntBASIC18.05■□□□□ 0.48
PCK1P35558 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCK1P35558 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 AL118508.1-201ENST00000613502 2345 ntBASIC18.04■□□□□ 0.48
PCK1P35558 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCK1P35558 HCG4P8-203ENST00000443049 980 ntBASIC18.04■□□□□ 0.48
PCK1P35558 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.04■□□□□ 0.48
PCK1P35558 MIR3652-201ENST00000579335 131 ntBASIC18.04■□□□□ 0.48
PCK1P35558 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.04■□□□□ 0.48
PCK1P35558 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 AP005117.1-201ENST00000584346 1413 ntBASIC18.04■□□□□ 0.48
PCK1P35558 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PCK1P35558 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCK1P35558 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCK1P35558 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCK1P35558 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PCK1P35558 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.03■□□□□ 0.48
PCK1P35558 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCK1P35558 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.03■□□□□ 0.48
PCK1P35558 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms